Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_M21
         (1147 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF026205-6|AAM69068.1|  908|Caenorhabditis elegans Hypothetical ...    29   4.7  
AF026205-5|AAB71258.1|  880|Caenorhabditis elegans Hypothetical ...    29   4.7  
AF026205-4|AAD47129.1|  885|Caenorhabditis elegans Hypothetical ...    29   4.7  
AF026205-3|AAB71257.1|  930|Caenorhabditis elegans Hypothetical ...    29   4.7  

>AF026205-6|AAM69068.1|  908|Caenorhabditis elegans Hypothetical
            protein T23E7.2e protein.
          Length = 908

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 20/73 (27%), Positives = 27/73 (36%)
 Frame = +3

Query: 825  PTAPPSYXXXAXPSXPLPRPHXXXATPXVLPXXLISAXLXXXXPTPREIXPXTSXPXRPS 1004
            P+  P     A PS   P P    A P  +P    SA      PTP+   P  + P   S
Sbjct: 318  PSEVPPTPKSAAPSEVPPTPKS--AAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRS 375

Query: 1005 VXXEXXPPXSRAS 1043
                  PP  +++
Sbjct: 376  AAPSDVPPTPKSN 388


>AF026205-5|AAB71258.1|  880|Caenorhabditis elegans Hypothetical
            protein T23E7.2b protein.
          Length = 880

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 20/73 (27%), Positives = 27/73 (36%)
 Frame = +3

Query: 825  PTAPPSYXXXAXPSXPLPRPHXXXATPXVLPXXLISAXLXXXXPTPREIXPXTSXPXRPS 1004
            P+  P     A PS   P P    A P  +P    SA      PTP+   P  + P   S
Sbjct: 268  PSEVPPTPKSAAPSEVPPTPKS--AAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRS 325

Query: 1005 VXXEXXPPXSRAS 1043
                  PP  +++
Sbjct: 326  AAPSDVPPTPKSN 338


>AF026205-4|AAD47129.1|  885|Caenorhabditis elegans Hypothetical
            protein T23E7.2c protein.
          Length = 885

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 20/73 (27%), Positives = 27/73 (36%)
 Frame = +3

Query: 825  PTAPPSYXXXAXPSXPLPRPHXXXATPXVLPXXLISAXLXXXXPTPREIXPXTSXPXRPS 1004
            P+  P     A PS   P P    A P  +P    SA      PTP+   P  + P   S
Sbjct: 318  PSEVPPTPKSAAPSEVPPTPKS--AAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRS 375

Query: 1005 VXXEXXPPXSRAS 1043
                  PP  +++
Sbjct: 376  AAPSDVPPTPKSN 388


>AF026205-3|AAB71257.1|  930|Caenorhabditis elegans Hypothetical
            protein T23E7.2a protein.
          Length = 930

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 20/73 (27%), Positives = 27/73 (36%)
 Frame = +3

Query: 825  PTAPPSYXXXAXPSXPLPRPHXXXATPXVLPXXLISAXLXXXXPTPREIXPXTSXPXRPS 1004
            P+  P     A PS   P P    A P  +P    SA      PTP+   P  + P   S
Sbjct: 318  PSEVPPTPKSAAPSEVPPTPKS--AAPSEVPLTPKSAAQSSVPPTPKSAVPSEAPPTPRS 375

Query: 1005 VXXEXXPPXSRAS 1043
                  PP  +++
Sbjct: 376  AAPSDVPPTPKSN 388


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,629,760
Number of Sequences: 27780
Number of extensions: 96306
Number of successful extensions: 120
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3109468484
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)