Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_M19
(1309 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 44 6e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 40 6e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 8e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.050
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 0.24
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.46
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.81
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 29 1.4
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 4.3
SPBC660.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.3
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 4.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 5.7
SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharom... 26 10.0
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 43.6 bits (98), Expect = 6e-05
Identities = 29/96 (30%), Positives = 30/96 (31%), Gaps = 1/96 (1%)
Frame = -3
Query: 998 PGARPPPPXGXXXPXPPXXRGGGXXPPPPXXXXXPXPXGGXGAGAPPXXXXXXXXPPPPA 819
P PP P P G P P P P +GAPP PP PA
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP---SGAPPVPKPSVAAPPVPA 1173
Query: 818 XXXGGGPXPXXGXXXGG-PPPXPXPXPPPPGXGXXP 714
G P P PPP P P P G P
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Score = 38.3 bits (85), Expect = 0.002
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 1/88 (1%)
Frame = -3
Query: 995 GARPPPPXGXXXPXPPXXRGGGXXPPPPXXXXXPXPXGGXGAGAPPXXXXXXXXPP-PPA 819
GA P P P P G PP P P +G PP PP PP
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSGA---PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Query: 818 XXXGGGPXPXXGXXXGGPPPXPXPXPPP 735
P P G PP P P P
Sbjct: 1195 SEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 36.7 bits (81), Expect = 0.007
Identities = 31/109 (28%), Positives = 32/109 (29%), Gaps = 13/109 (11%)
Frame = -3
Query: 998 PGARPPPPXGXXXPXPPXXRGGGXXPPPP------XXXXXPXPXGG----XGAGAPPXXX 849
P PP P P P G PPP P P G +G PP
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK 1096
Query: 848 XXXXXPPPPAXXXGGGPXPXXGXXXGGPPPXPXP---XPPPPGXGXXPP 711
PP P P P G PP P P PP P PP
Sbjct: 1097 PSVAAPPVPKPSVAVPPVP----APSGAPPVPKPSVAAPPVPVPSGAPP 1141
Score = 36.7 bits (81), Expect = 0.007
Identities = 42/175 (24%), Positives = 44/175 (25%), Gaps = 6/175 (3%)
Frame = -3
Query: 1217 PPPPGXXGXXGXXPPPGPXPXGGXXXRXGPXGXXXXXAXXXXXXXXXXXXXXXXXRXXXP 1038
PP P PPP P P P G A
Sbjct: 1050 PPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSV 1109
Query: 1037 AGXXRXXXXXGXXPGARPP---PPXGXXXPXPPXXRGGGXXPPPPXXXXXPXPXGGXGAG 867
A G P +P PP PP + PP P P P
Sbjct: 1110 A-VPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAP-PVPKPSVA 1167
Query: 866 APPXXXXXXXXPPPPAXXXGGGPXPXXGXXXGGPPPXPXP---XPPPPGXGXXPP 711
APP PP P G P P PP P P PP P PP
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSE----APPVPKPSVGVPPVPPPSTAPP 1218
Score = 33.9 bits (74), Expect = 0.050
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -3
Query: 995 GARPPPPXGXXXPXPPXXRGGGXXPPPPXXXXXPXPXGGXGAGAPPXXXXXXXXPPPPA 819
G P PP P P G PPP P P AG PP PP PA
Sbjct: 1187 GVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP----SAGLPPVPVPTAKAPPVPA 1241
Score = 33.5 bits (73), Expect = 0.066
Identities = 24/90 (26%), Positives = 25/90 (27%)
Frame = -3
Query: 980 PPXGXXXPXPPXXRGGGXXPPPPXXXXXPXPXGGXGAGAPPXXXXXXXXPPPPAXXXGGG 801
PP PP + PP P P AG PP PP P G
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEA-PPVPKPSVGVP 1208
Query: 800 PXPXXGXXXGGPPPXPXPXPPPPGXGXXPP 711
P P P P P P PP
Sbjct: 1209 PVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 31.5 bits (68), Expect = 0.27
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -3
Query: 992 ARPPPPXGXXXPXPPXXRGGGXXPPPPXXXXXPXPXGGXGAGAPPXXXXXXXXPPPPAXX 813
A PP P P G P PP P P G PP PP P
Sbjct: 1167 AAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK--PSVGVPP-VPPPSTAPPVPTPS 1223
Query: 812 XGGGPXPXXGXXXGGPPPXPXPXPPPP 732
G P P PP P P P
Sbjct: 1224 AGLPPVP---VPTAKAPPVPAPSSEAP 1247
Score = 30.7 bits (66), Expect = 0.46
Identities = 25/89 (28%), Positives = 25/89 (28%), Gaps = 1/89 (1%)
Frame = -3
Query: 995 GARPPPPXGXXXPXPPXXRGGGXXPPPPXXXXXPXPXGGXGAGAPPXXXXXXXXPP-PPA 819
GA P P P P G P P P P APP PP PP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSE---APPVPKPSVGVPPVPPP 1213
Query: 818 XXXGGGPXPXXGXXXGGPPPXPXPXPPPP 732
P P G P P P P
Sbjct: 1214 STAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.9 bits (59), Expect = 3.3
Identities = 22/96 (22%), Positives = 22/96 (22%)
Frame = -3
Query: 998 PGARPPPPXGXXXPXPPXXRGGGXXPPPPXXXXXPXPXGGXGAGAPPXXXXXXXXPPPPA 819
P PP P P P P A PP PP P
Sbjct: 967 PSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPL 1026
Query: 818 XXXGGGPXPXXGXXXGGPPPXPXPXPPPPGXGXXPP 711
P P P P P PP P P
Sbjct: 1027 PSADAPPIPVPS--TAPPVPIPTSTPPVPKSSSGAP 1060
Score = 27.9 bits (59), Expect = 3.3
Identities = 18/61 (29%), Positives = 18/61 (29%), Gaps = 6/61 (9%)
Frame = -2
Query: 990 PXPPPXGXXXPXP------PPXPGGGXXPPPPXPXXPXXPXGRXXGRGPPPXXXXXXXPP 829
P P P P P PP P PP P P P G P P P
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Query: 828 P 826
P
Sbjct: 1153 P 1153
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/69 (26%), Positives = 18/69 (26%)
Frame = -1
Query: 997 PGPXPPPXRXXXXXPPPXPGGGGXXPPPXPXXPXXXXXAXXGPGPPPXXXXXXAXPPPXR 818
P PP PP P G P P P G PP A P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG-APPVPKPSVAAPPVPAP 1155
Query: 817 XXGXGXPXP 791
P P
Sbjct: 1156 SGAPPVPKP 1164
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 40.3 bits (90), Expect = 6e-04
Identities = 30/99 (30%), Positives = 31/99 (31%), Gaps = 5/99 (5%)
Frame = -3
Query: 986 PPPPXG-XXXPXPPXXRGGGXXPPPPXXXXXPXPXGGXGAGAPPXXXXXXXXPPPP---- 822
PPPP PP G PP P P AG+ P PPPP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPP----PPPPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 821 AXXXGGGPXPXXGXXXGGPPPXPXPXPPPPGXGXXPPXG 705
A G P P PP P P P PP G
Sbjct: 369 APSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLG 407
Score = 36.3 bits (80), Expect = 0.009
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 3/84 (3%)
Frame = -2
Query: 1038 RGRXPGXXGXGXGARGPXPPPXGXXXPXPPPXPGGGXXPPPPXPXXPXXPXGRXXGRGPP 859
RG+ P G + P PPP P P G PPP P GR PP
Sbjct: 322 RGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQ----PP 377
Query: 858 P---XXXXXXXPPPPXXXXGXGXP 796
P P PP G P
Sbjct: 378 PLSSSRAVSNPPAPPPAIPGRSAP 401
Score = 35.9 bits (79), Expect = 0.012
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = -2
Query: 996 RGPXPPPXGXXXPXPPPXPGGGXXPPPPXPXXPXXPXGRXXGRGP-PPXXXXXXXPPPPX 820
R P PPP PP G P P P P G P PP PPPP
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPP--PPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 819 XXXGXGXPP 793
G P
Sbjct: 368 SAPSTGRQP 376
Score = 35.1 bits (77), Expect = 0.022
Identities = 28/94 (29%), Positives = 28/94 (29%), Gaps = 2/94 (2%)
Frame = -3
Query: 1007 GXXPGARPPPPXGXXXPXPPXXRGGGXXPP-PPXXXXXPXPXGGXGA-GAPPXXXXXXXX 834
G A PP PP P PP P GA APP
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIA 456
Query: 833 PPPPAXXXGGGPXPXXGXXXGGPPPXPXPXPPPP 732
PP PA P P PPP P P P P
Sbjct: 457 PPLPAGMPAAPPLPPAAP---APPPAPAPAPAAP 487
Score = 34.3 bits (75), Expect = 0.038
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = -1
Query: 997 PGPXPPPXRXXXXXPPPXPGGGGXXPPPXPXXPXXXXXAXXGPGPPPXXXXXXAXPPPXR 818
P P PPP R PP G PP P P A PP PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPP--PPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 817 XXGXGXPXP 791
G P
Sbjct: 369 APSTGRQPP 377
Score = 33.1 bits (72), Expect = 0.087
Identities = 21/68 (30%), Positives = 22/68 (32%), Gaps = 1/68 (1%)
Frame = -3
Query: 896 PXPXGGXGAGAPPXXXXXXXXPPPPAXXXGGGPXPXXGXXXGG-PPPXPXPXPPPPGXGX 720
P P A A PPPP+ G P G PPP P P G
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
Query: 719 XPPXGGXA 696
PP G A
Sbjct: 353 LPPQGRSA 360
Score = 31.5 bits (68), Expect = 0.27
Identities = 21/74 (28%), Positives = 21/74 (28%), Gaps = 4/74 (5%)
Frame = -2
Query: 990 PXPPPX--GXXXPXPPPXPGGGXXPPPPXPXXPXXPXGRXXGRGP--PPXXXXXXXPPPP 823
P PPP G P PP PP P P P P PP PP
Sbjct: 389 PAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Query: 822 XXXXGXGXPPXXXG 781
PP G
Sbjct: 449 LPPSAPIAPPLPAG 462
Score = 30.3 bits (65), Expect = 0.61
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -2
Query: 990 PXPPPXGXXXPXPPPXPGGGXXPPPPXPXXPXXP 889
P PP P PP P G PP P P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 29.9 bits (64), Expect = 0.81
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = -1
Query: 991 PXPPPXRXXXXXPPPXPGGGGXXPPPXPXXPXXXXXAXXGPGPPPXXXXXXAXPP 827
P P PP P G PP P P P PP A PP
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -2
Query: 990 PXPPPXGXXXPXPPPXPGGGXXPPPPXPXXPXXP 889
P PP P PP P PPP P P
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.9 bits (89), Expect = 8e-04
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -2
Query: 990 PXPPPXGXXXPXPPPXPG-GGXXPPPPXPXXPXXPXGRXXGRGPPP 856
P P P P PPP PG G PPPP P P G P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 38.3 bits (85), Expect = 0.002
Identities = 23/59 (38%), Positives = 23/59 (38%)
Frame = -2
Query: 984 PPPXGXXXPXPPPXPGGGXXPPPPXPXXPXXPXGRXXGRGPPPXXXXXXXPPPPXXXXG 808
P P P PPP P G PPPP P G GPPP PPPP G
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPG-------VAGAGPPP-----PPPPPPAVSAG 788
Score = 37.5 bits (83), Expect = 0.004
Identities = 24/63 (38%), Positives = 24/63 (38%)
Frame = -3
Query: 923 PPPPXXXXXPXPXGGXGAGAPPXXXXXXXXPPPPAXXXGGGPXPXXGXXXGGPPPXPXPX 744
PPPP P P A AP PPPA GG P P G P P P
Sbjct: 733 PPPPPAVIVPTP-----APAP-------IPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Query: 743 PPP 735
PPP
Sbjct: 781 PPP 783
Score = 37.5 bits (83), Expect = 0.004
Identities = 25/65 (38%), Positives = 25/65 (38%)
Frame = -3
Query: 998 PGARPPPPXGXXXPXPPXXRGGGXXPPPPXXXXXPXPXGGXGAGAPPXXXXXXXXPPPPA 819
P P P P PP G PPP P P G GAG PP PPPPA
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPP------PPPPGVAGAGPPP------PPPPPPA 784
Query: 818 XXXGG 804
GG
Sbjct: 785 VSAGG 789
Score = 37.1 bits (82), Expect = 0.005
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -1
Query: 997 PGPXPPPXRXXXXXPPPXPGGGGXXPPPXPXXP 899
P P P P PPP PG G PPP P P
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 34.3 bits (75), Expect = 0.038
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 1232 GGXPXPPPPGXXGXXGXXPPPGPXP 1158
GG P PPPP G PPP P P
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.12
Identities = 23/57 (40%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = -2
Query: 954 PPPXPGGGXXPPP---PXPXXPXXPXGRXXGRGPPPXXXXXXXPPPPXXXXGXGXPP 793
PPP P P P P P P P G GPPP PPPP G G PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP---IMG-GPPP-------PPPPPGVAGAGPPP 777
Score = 32.7 bits (71), Expect = 0.12
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Frame = -3
Query: 833 PPPPAXXXGGG-----PXPXXGXXXGGPPPXPXPXPPPPGXGXXPP 711
PPPPA P P GGPPP P P P G G PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPP-PPPPPGVAGAGPPPP 778
Score = 30.3 bits (65), Expect = 0.61
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 1002 GARGPXPPPXGXXXPXPPPXPGGGXXPPPP 913
G P PPP G PPP P PPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPP-----PPPP 783
Score = 29.9 bits (64), Expect = 0.81
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -3
Query: 998 PGARPPPPXGXXXPXPPXXRGGGXXPPPPXXXXXPXPXGGXGAGAP 861
P P P G P PP G PPPP GG AP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAP 795
Score = 27.9 bits (59), Expect = 3.3
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 5/49 (10%)
Frame = -3
Query: 863 PPXXXXXXXXPPPPAXXXGGGPXPXXGXXXGGPPPXPXP-----XPPPP 732
PP P PA P P G G PPP P P PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMG---GPPPPPPPPGVAGAGPPPP 778
Score = 27.9 bits (59), Expect = 3.3
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 1/36 (2%)
Frame = -3
Query: 1232 GGXPXPPPPGXXGXXGXXPPPGP-XPXGGXXXRXGP 1128
G P PPPPG G PPP P G P
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAP 795
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = -3
Query: 800 PXPXXGXXXGGPPPXPXPXPPP-PGXGXXPP 711
P P P P P P PPP P G PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP 763
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.9 bits (74), Expect = 0.050
Identities = 24/60 (40%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Frame = +2
Query: 827 GGGXXXXXXXGGGPRPXXRPXGXXGXXGXGGGG--XXPPPGXGGGXG--XXXPXGGGXGP 994
GGG GGP P P G G G GG G G GGG G P G G GP
Sbjct: 187 GGGFGGFGGGSGGPPPG--PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP 244
Score = 31.1 bits (67), Expect = 0.35
Identities = 30/88 (34%), Positives = 30/88 (34%), Gaps = 3/88 (3%)
Frame = +1
Query: 733 GGGGXGXGXG-GGPPXXXPXXGXGPPPXXXAGGGGXXXXXXXXGGAPA--PXPPXGXGXX 903
GGG G G G GGPP P G G G GG P P G G
Sbjct: 187 GGGFGGFGGGSGGPP---PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 904 XXXGGGGXXPPPRXXGGXGXXXPXGGGG 987
GGG GG G P G GG
Sbjct: 244 PGGFGGGLGGFGGGPGGFG-GGPGGHGG 270
Score = 26.6 bits (56), Expect = 7.6
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = +2
Query: 794 GGXPXPXXXXGGGGXXXXXXXGGGPRPXXRPXGXXGXXGXGGGG-XXPPPGXGGGXGXXX 970
GG P GG G GG G G G G GG P G GGG G
Sbjct: 195 GGSGGPPPGPGGFGGF------GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
Query: 971 PXGGGXG 991
GG G
Sbjct: 249 GGLGGFG 255
Score = 26.2 bits (55), Expect = 10.0
Identities = 22/73 (30%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = +3
Query: 783 PXXGXGXPXPXXRXGGGXAXXXXXXGGGPGPXXAXXXXXGXXGXGGGXXPPPPGXGGG-X 959
P G G GG G G GP G G GG G GGG
Sbjct: 200 PPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Query: 960 XXXXRXGGGXGPG 998
GG GPG
Sbjct: 260 GFGGGPGGHGGPG 272
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 712 GGXXPXPGGGGXGXGXGGGP 771
GG PGG G G G GGP
Sbjct: 252 GGFGGGPGGFGGGPGGHGGP 271
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect(2) = 0.24
Identities = 13/46 (28%), Positives = 14/46 (30%)
Frame = -3
Query: 875 GAGAPPXXXXXXXXPPPPAXXXGGGPXPXXGXXXGGPPPXPXPXPP 738
G AP PPP+ P PP P P PP
Sbjct: 152 GVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 23.0 bits (47), Expect(2) = 0.24
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 755 PXPXPPPPGXGXXPP 711
P P PPPP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.46
Identities = 26/91 (28%), Positives = 26/91 (28%), Gaps = 4/91 (4%)
Frame = -3
Query: 992 ARPPPPXGXXXPXPPXXRGGGXXPPPPXXXXXPXPXGGXGAGAPPXXXXXXXXP---PPP 822
A PP P P PP P P A APP P PPP
Sbjct: 120 ASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSP-----ASAPPIPSKAPPIPSSLPPP 174
Query: 821 AXXXGGGPXPXXGXXX-GGPPPXPXPXPPPP 732
A P PP P PPPP
Sbjct: 175 AQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.81
Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Frame = -2
Query: 990 PXPPPXGXXXPXPP---PXPGG-GXXPPPPXP 907
P PPP P PP P P G PPPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -2
Query: 984 PPPXGXXXPXPPPXPGGGXXPPPPXPXXPXXPXGRXXGRGPPPXXXXXXXPPPP 823
PP P PPP PPP P P P PPP P P
Sbjct: 1699 PPQMSAPTPPPPPM---SVPPPPSAPPMPAGPPS-----APPPPLPASSAPSVP 1744
Score = 27.1 bits (57), Expect = 5.7
Identities = 21/77 (27%), Positives = 23/77 (29%)
Frame = -3
Query: 935 GGXXPPPPXXXXXPXPXGGXGAGAPPXXXXXXXXPPPPAXXXGGGPXPXXGXXXGGPPPX 756
GG P P P + APP PPP + P P GPP
Sbjct: 1679 GGMAPAHPVSTPPVRPQ----SAAPPQMSAPTPPPPPMSVP----PPPSAPPMPAGPPSA 1730
Query: 755 PXPXPPPPGXGXXPPXG 705
P P P P G
Sbjct: 1731 PPPPLPASSAPSVPNPG 1747
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 29.1 bits (62), Expect = 1.4
Identities = 24/71 (33%), Positives = 24/71 (33%)
Frame = +2
Query: 824 GGGGXXXXXXXGGGPRPXXRPXGXXGXXGXGGGGXXPPPGXGGGXGXXXPXGGGXGPRAP 1003
GGGG GG G G GGG P G G GGG GP A
Sbjct: 135 GGGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGG---MPGGFANMFG-----GGGAGPHAR 186
Query: 1004 XPXPXXPGXRP 1036
P G RP
Sbjct: 187 RSHPSFGGSRP 197
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 918 GGXXPPPPGXGGGXXXXXRXGGGXGPG 998
G PPPPG GG G GPG
Sbjct: 72 GNAAPPPPGAEGGPGAGFGGFPGAGPG 98
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -2
Query: 981 PPXGXXXPXPPPXPGGGXXPPPPXP 907
PP P PPP PPPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -3
Query: 1229 GXPXPPPPGXXGXXGXXPPPGPXP 1158
G P PPPP PPP P P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 5.7
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3
Query: 767 PPPXPXPXPPPPG 729
PP P P PPPPG
Sbjct: 5 PPGNPPPPPPPPG 17
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = -3
Query: 803 GPXPXXGXXXGGPPPXPXPXPPPPG 729
G P G PP P PPPPG
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 990 PXPPPXGXXXPXPPPXPGGGXXPPP 916
P PPP G P PP P PPP
Sbjct: 11 PPPPPPGFEPPSQPPPP-----PPP 30
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 1232 GGXPXPPPPGXXGXXGXXPPPGP 1164
G P PPPP PPP P
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 960 PXPPPXPGGGXXPPPPXPXXP 898
P PPP P G P P P P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -2
Query: 960 PXPPPXPGGGXXPPPPXPXXP 898
P PPP PG PP P P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
>SPBC660.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 143
Score = 27.5 bits (58), Expect = 4.3
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +1
Query: 871 APXPPXGXGXXXXXGGGGXXP---PPRXXGGXGXXXPXGGGGR 990
AP PP G GGG P P GG G G GGR
Sbjct: 98 APPPPRGPLFGPRIGGGHHGPLHGPHGGFGGRGGGRMGGRGGR 140
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.5 bits (58), Expect = 4.3
Identities = 20/75 (26%), Positives = 20/75 (26%), Gaps = 1/75 (1%)
Frame = -2
Query: 1002 GARGPXPPPXGXXXPXP-PPXPGGGXXPPPPXPXXPXXPXGRXXGRGPPPXXXXXXXPPP 826
G P PP P PP PG P P P G G P P
Sbjct: 488 GTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPA 547
Query: 825 PXXXXGXGXPPXXXG 781
G PP G
Sbjct: 548 MPGIPGATAPPGAPG 562
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.1 bits (57), Expect = 5.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 30 ARPGRRPXXXGAGAXAXGRGGXPGXRXXXXRRXXAGGXGGR 152
+R GR G G GRGG G R G GGR
Sbjct: 7 SRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGR 47
>SPAC26A3.08 |smb1|smb|Sm snRNP core protein Smb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 147
Score = 26.2 bits (55), Expect = 10.0
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 2/52 (3%)
Frame = -2
Query: 1062 RGXAXXXPRGRXPGXXGXGXGAR--GPXPPPXGXXXPXPPPXPGGGXXPPPP 913
RG P P G G G P G PPP G G PPP
Sbjct: 91 RGSLLSGPGVARPAGRGIPLGQAPVGLAGPVRGVGYTAPPPPAGFGRGAPPP 142
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.152 0.530
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,343,668
Number of Sequences: 5004
Number of extensions: 45370
Number of successful extensions: 398
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 715384080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
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