Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_M18
(951 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces pomb... 29 0.73
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 29 0.96
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 29 0.96
SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.3
SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyc... 29 1.3
SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2 |Sch... 28 2.2
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 2.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 27 3.9
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 27 5.1
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 5.1
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 6.8
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 26 6.8
SPBC14C8.02 |tim44||TIM23 translocase complex subunit Tim44|Schi... 26 6.8
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 26 9.0
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 26 9.0
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 26 9.0
SPCC364.06 |nap1||nucleosome assembly protein Nap1 |Schizosaccha... 26 9.0
>SPAC24C9.11 |||MIF4G/MA4 domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 775
Score = 29.5 bits (63), Expect = 0.73
Identities = 11/23 (47%), Positives = 19/23 (82%)
Frame = +3
Query: 177 KELARLKKMLGVKDEEKPAGSEV 245
+E+A L+KMLG+K ++K A S++
Sbjct: 115 REIAHLEKMLGIKSKDKSAHSKI 137
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 29.1 bits (62), Expect = 0.96
Identities = 19/81 (23%), Positives = 37/81 (45%)
Frame = +3
Query: 171 AVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSS 350
A KE+ RL ++ SE+ ++E+V + K + L D E ++E+V +
Sbjct: 77 ATKEIDRLYELENEGSSSSSESSEITDNEEVASASSKSTKSEE--LTDEESEDEEVYDPA 134
Query: 351 DDENVVVDSEGGKKRVFNTKT 413
E ++ SE + ++T
Sbjct: 135 RGEGIISTSESSDESDAESET 155
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 29.1 bits (62), Expect = 0.96
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Frame = +3
Query: 24 IGNSLR-F*RDYLQKRVALLQNIFCF*NAMAKSIRSRWKRKCRAIKRERYAVKELARLKK 200
I NS+R ++ L+K + L+N + S+R + ++ ++ + RY+++ +A +K
Sbjct: 797 IANSVRNALKNNLEKIESFLENSIA---ELQNSVREDFDKQTSSLAQLRYSIQNVAHAQK 853
Query: 201 MLGVKDEEKPAGSEVMES-EQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDS 377
VK E + +E + + DLK KV E + + NV V S
Sbjct: 854 ESEVKYNELNEQVKTLEGYVETVLEKFNDLKIENKVPETAPDVVPSSYPPAAESNVSVSS 913
Query: 378 EGGKKRV 398
+ K V
Sbjct: 914 DTSTKDV 920
>SPCC1259.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 394
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 297 KKVLEDI-EKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQY 437
K VLED+ +KDNE SD+E+ V D E F+ K N +Y
Sbjct: 160 KGVLEDVLKKDNELKFNDSDEEDEVDDEEIESFNSFSRKMQTISNSRY 207
>SPBC4B4.02c |nca2||mitochondrial protein Nca2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 28.7 bits (61), Expect = 1.3
Identities = 24/75 (32%), Positives = 38/75 (50%)
Frame = +3
Query: 126 SRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 305
SR +R+ R + R A + L R +KM + D G V + + + D+ SK V
Sbjct: 481 SRAERRQRFRQSLRAAERILVRSQKMNSLDDMSY--GLLVFQVNLMAIMSM-DMGLSKDV 537
Query: 306 LEDIEKDNEDVEMSS 350
ED+ +D ED++ SS
Sbjct: 538 AEDLLQDLEDIQSSS 552
>SPAPB17E12.04c |csn2||COP9/signalosome complex subunit Csn2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 437
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +3
Query: 303 VLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQN 428
+LED E N D E DD++++ + +N+K+LK++N
Sbjct: 6 MLEDDE--NYDFEFEDDDDDMIEPYVDVENCYYNSKSLKEEN 45
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 283 SPASRNITCSDSITSLPAGFSSSLTPSIFFNRANS--FTAYRSRLIALH 143
+PAS T + S++S + SSS TPS + A S + S LIAL+
Sbjct: 749 TPASSTSTTTSSVSSRQSSSSSSFTPSSAISTAKSSFVLSTLSILIALY 797
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -3
Query: 280 PASRNITCSDSITSLPAGFSSSLTPSIF 197
P S + S SIT++ +G SSS PS F
Sbjct: 546 PTSSSSDFSSSITTISSGISSSSIPSTF 573
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 26.6 bits (56), Expect = 5.1
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +3
Query: 111 AKSIRSRWKRKCRAIKR-ERYAVKE-LARLKKMLG--VKDEEKPAGSEVMESEQVIFLDA 278
+KS+R+ K RAI +R+ V E +++L + +K K E E VI +D
Sbjct: 1582 SKSVRT----KLRAISTIQRFPVSEWVSKLDTHVRNCIKFSHKQNLEEDFIHEPVIDVDE 1637
Query: 279 GDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEG 383
+ SK DI+ D ED+E+ +N +DS G
Sbjct: 1638 FAISSSK----DIDAD-EDLEIIGSSDNKAIDSNG 1667
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 26.6 bits (56), Expect = 5.1
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +3
Query: 60 QKRVALL--QNIFCF*NAMAKSIRSRWKRKCRAIKRERYAVKELARLKKML 206
Q+R LL QN A K ++ K+ IKR VKEL +++K L
Sbjct: 99 QRREVLLALQNFHVIVIAPCKEVKGYVKKAVEMIKRRDKKVKELEKIQKEL 149
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/28 (39%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +3
Query: 249 ESEQVIFLDAGDLKKS-KKVLEDIEKDN 329
E +++ DA ++K+ K+V+ED+EK+N
Sbjct: 1600 EEHSIVYEDAKLMEKTLKEVIEDLEKNN 1627
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 26.2 bits (55), Expect = 6.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 249 ESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSS 350
+ E + +L D+ K KK E +EK N+D + S
Sbjct: 54 QKEFLPYLTTEDVGKHKKTKESLEKSNDDSQKIS 87
>SPBC14C8.02 |tim44||TIM23 translocase complex subunit
Tim44|Schizosaccharomyces pombe|chr 2|||Manual
Length = 427
Score = 26.2 bits (55), Expect = 6.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 132 WKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVME 251
WK K IK E V+++ LKK ++ E P S + +
Sbjct: 211 WKNKVEQIKNESRLVRKIQELKK--SYQESEHPIVSSIRD 248
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 9.0
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 192 LKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVV 371
LK +G+K+ E S +SE ++F + D K L D+E + + S +V
Sbjct: 215 LKSYIGLKNMEYRVRSSFNQSETIVFSGSED---GKVYLWDLENETQITSTSVVGTPIVT 271
Query: 372 D 374
D
Sbjct: 272 D 272
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 324 DNEDVEMSSDDENVVVDSEGGKK 392
+ EDVEM S+D++ +SE G K
Sbjct: 1322 NEEDVEMRSEDQSDTSESEVGSK 1344
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 279 GDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQ 434
GDLKK +V + E D+ S E + S K R++ + G+
Sbjct: 17 GDLKKDVEVAQPPEDSISDLAFSPQAEYLAASSWDSKVRIYEVQATGQSIGK 68
>SPCC364.06 |nap1||nucleosome assembly protein Nap1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 393
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 312 DIEKDNEDVEMSSDDENVVVDSE 380
D+E+D +DVE SS++E V DS+
Sbjct: 351 DVEEDEDDVESSSNEE--VSDSD 371
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,320,033
Number of Sequences: 5004
Number of extensions: 37838
Number of successful extensions: 208
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 485316198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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