Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_M18
(951 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC070232-1|AAH70232.1| 129|Homo sapiens chromosome 12 open read... 62 3e-09
BC006002-1|AAH06002.1| 129|Homo sapiens chromosome 12 open read... 62 3e-09
AK091568-1|BAC03699.1| 129|Homo sapiens protein ( Homo sapiens ... 62 3e-09
BC107780-1|AAI07781.1| 129|Homo sapiens chromosome 12 open read... 62 4e-09
AB209999-1|BAE06081.1| 1731|Homo sapiens JARID1A variant protein... 38 0.054
S66431-1|AAB28544.1| 1722|Homo sapiens retinoblastoma binding pr... 35 0.38
BC028393-1|AAH28393.1| 947|Homo sapiens MYCBP associated protei... 33 1.5
AB083068-1|BAB88692.1| 947|Homo sapiens AMAP-1 protein. 33 1.5
M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein. 33 2.0
BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein. 33 2.0
BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein. 33 2.0
BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein. 33 2.0
AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens ... 33 2.0
AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein. 33 2.0
Z22780-1|CAA80457.1| 598|Homo sapiens cylicin protein. 31 4.7
BC126461-1|AAI26462.1| 651|Homo sapiens cylicin, basic protein ... 31 4.7
BC070355-1|AAH70355.1| 433|Homo sapiens CYLC1 protein protein. 31 4.7
BC038787-1|AAH38787.1| 563|Homo sapiens CYLC1 protein protein. 31 4.7
AL627233-1|CAI40037.1| 651|Homo sapiens cylicin, basic protein ... 31 4.7
AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens ... 31 6.2
AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein. 31 6.2
X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein. 31 8.1
D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator... 31 8.1
BX119917-1|CAI39851.1| 569|Homo sapiens retrotransposon gag dom... 31 8.1
BC151224-1|AAI51225.1| 569|Homo sapiens RGAG4 protein protein. 31 8.1
AY517554-1|AAT44527.1| 407|Homo sapiens hypothetical rhabdomyos... 31 8.1
AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix... 31 8.1
AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix... 31 8.1
AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix... 31 8.1
AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix... 31 8.1
AB082532-1|BAC02710.1| 689|Homo sapiens KIAA2001 protein protein. 31 8.1
>BC070232-1|AAH70232.1| 129|Homo sapiens chromosome 12 open reading
frame 31 protein.
Length = 129
Score = 62.1 bits (144), Expect = 3e-09
Identities = 46/115 (40%), Positives = 64/115 (55%)
Frame = +3
Query: 108 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL 287
MAKS+RS+WKRK RA KR++ A KE +RLK +L K G +M+ Q I +
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNAPKEASRLKSIL------KLDGDVLMKDVQEIATVV--V 52
Query: 288 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 452
K K E ++ + +D DD + D KR N KTL DQ+GQYP+W++
Sbjct: 53 PKPKHCQEKMQCEVKD---EKDDMKMETDI----KR--NKKTLLDQHGQYPIWMN 98
>BC006002-1|AAH06002.1| 129|Homo sapiens chromosome 12 open reading
frame 31 protein.
Length = 129
Score = 62.1 bits (144), Expect = 3e-09
Identities = 46/115 (40%), Positives = 64/115 (55%)
Frame = +3
Query: 108 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL 287
MAKS+RS+WKRK RA KR++ A KE +RLK +L K G +M+ Q I +
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNAPKEASRLKSIL------KLDGDVLMKDVQEIATVV--V 52
Query: 288 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 452
K K E ++ + +D DD + D KR N KTL DQ+GQYP+W++
Sbjct: 53 PKPKHCQEKMQCEVKD---EKDDMKMETDI----KR--NKKTLLDQHGQYPIWMN 98
>AK091568-1|BAC03699.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ34249 fis, clone FCBBF4000500. ).
Length = 129
Score = 62.1 bits (144), Expect = 3e-09
Identities = 46/115 (40%), Positives = 64/115 (55%)
Frame = +3
Query: 108 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL 287
MAKS+RS+WKRK RA KR++ A KE +RLK +L K G +M+ Q I +
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNAPKEASRLKSIL------KLDGDVLMKDVQEIATVV--V 52
Query: 288 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 452
K K E ++ + +D DD + D KR N KTL DQ+GQYP+W++
Sbjct: 53 PKPKHCQEKMQCEVKD---EKDDMKMETDI----KR--NKKTLLDQHGQYPIWMN 98
>BC107780-1|AAI07781.1| 129|Homo sapiens chromosome 12 open reading
frame 31 protein.
Length = 129
Score = 61.7 bits (143), Expect = 4e-09
Identities = 46/115 (40%), Positives = 64/115 (55%)
Frame = +3
Query: 108 MAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDL 287
MAKS+RS+WKRK RA KR++ A KE +RLK +L K G +M+ Q I +
Sbjct: 1 MAKSLRSKWKRKMRAEKRKKNAPKEASRLKSIL------KLDGDVLMKDVQEIATVV--V 52
Query: 288 KKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQNGQYPVWLH 452
K K E ++ + +D DD + D KR N KTL DQ+GQYP+W++
Sbjct: 53 PKPKHCQEKMQCEVKD---EKDDMKMGTDI----KR--NKKTLLDQHGQYPIWMN 98
>AB209999-1|BAE06081.1| 1731|Homo sapiens JARID1A variant protein
protein.
Length = 1731
Score = 37.9 bits (84), Expect = 0.054
Identities = 27/131 (20%), Positives = 59/131 (45%)
Frame = +3
Query: 60 QKRVALLQNIFCF*NAMAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGS 239
++++ ++ +F +K ++ K + + +K KEL +L K L ++E K
Sbjct: 1548 KRKLEKVEQLFGEGKQKSKELKKMDKPRKKKLKLGADKSKELNKLAKKLAKEEERKKKKE 1607
Query: 240 EVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLK 419
+ ++ + ++ + K+ KKVL+ K + SDDEN V ++ ++ +
Sbjct: 1608 KAAAAKVELVKESTEKKREKKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCKDKVDWV 1667
Query: 420 DQNGQYPVWLH 452
+G W H
Sbjct: 1668 QCDGGCDEWFH 1678
>S66431-1|AAB28544.1| 1722|Homo sapiens retinoblastoma binding protein
2 protein.
Length = 1722
Score = 35.1 bits (77), Expect = 0.38
Identities = 23/103 (22%), Positives = 50/103 (48%)
Frame = +3
Query: 60 QKRVALLQNIFCF*NAMAKSIRSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGS 239
++++ ++ +F +K ++ K + + +K K+L +L K L ++E K
Sbjct: 1512 KRKLEKVEQLFGEGKQKSKELKKMDKPRKKKLKLGADKSKKLNKLAKKLAKEEERKKKKE 1571
Query: 240 EVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDDENVV 368
+ ++ + ++ + K+ KKVL+ K + SDDEN V
Sbjct: 1572 KAAAAKVELVKESTEKKREKKVLDIPSKYDWSGAEESDDENAV 1614
>BC028393-1|AAH28393.1| 947|Homo sapiens MYCBP associated protein
protein.
Length = 947
Score = 33.1 bits (72), Expect = 1.5
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 147 RAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKD 326
+A K ER K A+ KK LG+KD+E G++++ E K KKV++ +D
Sbjct: 824 KAGKEER---KGAAQEKKQLGIKDKEDKKGAKLLGKEDRPNSKKHKAKDDKKVIKSASQD 880
Query: 327 NEDVEMSSDD 356
+E + D
Sbjct: 881 RFSLEDPTPD 890
>AB083068-1|BAB88692.1| 947|Homo sapiens AMAP-1 protein.
Length = 947
Score = 33.1 bits (72), Expect = 1.5
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = +3
Query: 147 RAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKD 326
+A K ER K A+ KK LG+KD+E G++++ E K KKV++ +D
Sbjct: 824 KAGKEER---KGAAQEKKQLGIKDKEDKKGAKLLGKEDRPNSKKHKAKDDKKVIKSASQD 880
Query: 327 NEDVEMSSDD 356
+E + D
Sbjct: 881 RFSLEDPTPD 890
>M60858-1|AAA59954.1| 707|Homo sapiens nucleolin protein.
Length = 707
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +3
Query: 279 GDLKKSKKVLEDIEKDNEDVEMSSDDEN------VVVDSEGGKK 392
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>BC006516-1|AAH06516.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +3
Query: 279 GDLKKSKKVLEDIEKDNEDVEMSSDDEN------VVVDSEGGKK 392
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>BC006494-1|AAH06494.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +3
Query: 279 GDLKKSKKVLEDIEKDNEDVEMSSDDEN------VVVDSEGGKK 392
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>BC002343-1|AAH02343.3| 482|Homo sapiens NCL protein protein.
Length = 482
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +3
Query: 279 GDLKKSKKVLEDIEKDNEDVEMSSDDEN------VVVDSEGGKK 392
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>AK091742-1|BAC03738.1| 687|Homo sapiens protein ( Homo sapiens
cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to
NUCLEOLIN. ).
Length = 687
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +3
Query: 279 GDLKKSKKVLEDIEKDNEDVEMSSDDEN------VVVDSEGGKK 392
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>AC017104-2|AAY24247.1| 710|Homo sapiens unknown protein.
Length = 710
Score = 32.7 bits (71), Expect = 2.0
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +3
Query: 279 GDLKKSKKVLEDIEKDNEDVEMSSDDEN------VVVDSEGGKK 392
GD KK +++E+D+ED EMS D+E+ VV+ + GKK
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKK 55
>Z22780-1|CAA80457.1| 598|Homo sapiens cylicin protein.
Length = 598
Score = 31.5 bits (68), Expect = 4.7
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 273 DAGDLKK-SKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 425
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 249 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 298
>BC126461-1|AAI26462.1| 651|Homo sapiens cylicin, basic protein of
sperm head cytoskeleton 1 protein.
Length = 651
Score = 31.5 bits (68), Expect = 4.7
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 273 DAGDLKK-SKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 425
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 302 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 351
>BC070355-1|AAH70355.1| 433|Homo sapiens CYLC1 protein protein.
Length = 433
Score = 31.5 bits (68), Expect = 4.7
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 273 DAGDLKK-SKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 425
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 301 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 350
>BC038787-1|AAH38787.1| 563|Homo sapiens CYLC1 protein protein.
Length = 563
Score = 31.5 bits (68), Expect = 4.7
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 273 DAGDLKK-SKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 425
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 208 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 257
>AL627233-1|CAI40037.1| 651|Homo sapiens cylicin, basic protein of
sperm head cytoskeleton protein.
Length = 651
Score = 31.5 bits (68), Expect = 4.7
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +3
Query: 273 DAGDLKK-SKKVLEDIEKDNEDVEMSSDDENVVVDSEGGKKRVFNTKTLKDQ 425
D+ D KK SKKV ++++KD++ ++ D E+ D+E G + T KD+
Sbjct: 302 DSKDAKKDSKKVKKNVKKDDKKKDVKKDTES--TDAESGDSKDERKDTKKDK 351
>AK127608-1|BAC87055.1| 603|Homo sapiens protein ( Homo sapiens
cDNA FLJ45706 fis, clone FEBRA2028457, highly similar
to Nucleolin. ).
Length = 603
Score = 31.1 bits (67), Expect = 6.2
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 279 GDLKKSKKVLEDIEKDNEDVEMSSDDEN 362
GD KK +++E+D+ED EMS D+E+
Sbjct: 12 GDPKKMAPPPKEVEEDSEDEEMSEDEED 39
>AF106680-1|AAD43033.1| 1031|Homo sapiens RNA helicase protein.
Length = 1031
Score = 31.1 bits (67), Expect = 6.2
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 123 RSRWKRKCRAIKRERYAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKK 302
RSR +R+ R+ R R + R + + K A + E+ + GD K KK
Sbjct: 78 RSRERRRSRSRDRRRSRSRSRGRRSRSSSPGSKSKKAENRSRSKEKA---EGGDSSKEKK 134
Query: 303 VLEDIEKDNEDVEMSSDDEN 362
+D ++D ++ + + D+N
Sbjct: 135 KDKDDKEDEKEKDAGNFDQN 154
>X72889-1|CAA51407.1| 1586|Homo sapiens HBRM protein.
Length = 1586
Score = 30.7 bits (66), Expect = 8.1
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +3
Query: 135 KRKCRAIKRER---YAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 305
KRK R ++ + + +K+ A ++++ ++EEK G + V + DA K+ +
Sbjct: 1265 KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRA 1324
Query: 306 LED--IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 410
+ED +E+ E+V + VD + K+ V K
Sbjct: 1325 IEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAK 1361
>D26155-1|BAA05142.1| 1572|Homo sapiens transcriptional activator
hSNF2a protein.
Length = 1572
Score = 30.7 bits (66), Expect = 8.1
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +3
Query: 135 KRKCRAIKRER---YAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 305
KRK R ++ + + +K+ A ++++ ++EEK G + V + DA K+ +
Sbjct: 1269 KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRA 1328
Query: 306 LED--IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 410
+ED +E+ E+V + VD + K+ V K
Sbjct: 1329 IEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAK 1365
>BX119917-1|CAI39851.1| 569|Homo sapiens retrotransposon gag domain
containing 4 protein.
Length = 569
Score = 30.7 bits (66), Expect = 8.1
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +3
Query: 177 KELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDD 356
K + ++ + K+EE+ E M+ ++ + + K K+ E+I NE+ S D+
Sbjct: 364 KRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDE 423
Query: 357 ENVVVDSEGGKK 392
E+ D +GG+K
Sbjct: 424 ED--EDEDGGQK 433
>BC151224-1|AAI51225.1| 569|Homo sapiens RGAG4 protein protein.
Length = 569
Score = 30.7 bits (66), Expect = 8.1
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +3
Query: 177 KELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDD 356
K + ++ + K+EE+ E M+ ++ + + K K+ E+I NE+ S D+
Sbjct: 364 KRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDE 423
Query: 357 ENVVVDSEGGKK 392
E+ D +GG+K
Sbjct: 424 ED--EDEDGGQK 433
>AY517554-1|AAT44527.1| 407|Homo sapiens hypothetical
rhabdomyosarcoma antigen MU-RMS-40.2A protein.
Length = 407
Score = 30.7 bits (66), Expect = 8.1
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Frame = +3
Query: 135 KRKCRAIKRERYAVK---ELARLKKMLGVKDEEKPAGSEVME----------SEQVIFLD 275
KRK R KR+ K E+A L K V EE EV+ +EQ L
Sbjct: 239 KRKLREAKRQECETKIAQEIASLSKE-DVSKEEMNENEEVINILLAQENEILTEQEELLA 297
Query: 276 AGDLKKSKKVLEDIEKDNEDVEMSSDDENVVVDSE 380
+ + +LED+++ NE++E+ ++ N + E
Sbjct: 298 MEQFLRRQIILEDLQRQNEELEIKNNHLNQAIHEE 332
>AL359076-4|CAI12968.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 30.7 bits (66), Expect = 8.1
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +3
Query: 135 KRKCRAIKRER---YAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 305
KRK R ++ + + +K+ A ++++ ++EEK G + V + DA K+ +
Sbjct: 1269 KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRA 1328
Query: 306 LED--IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 410
+ED +E+ E+V + VD + K+ V K
Sbjct: 1329 IEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAK 1365
>AL359076-3|CAI12967.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 30.7 bits (66), Expect = 8.1
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +3
Query: 135 KRKCRAIKRER---YAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 305
KRK R ++ + + +K+ A ++++ ++EEK G + V + DA K+ +
Sbjct: 1269 KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRA 1328
Query: 306 LED--IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 410
+ED +E+ E+V + VD + K+ V K
Sbjct: 1329 IEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAK 1365
>AL138755-9|CAI14600.1| 1572|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1572
Score = 30.7 bits (66), Expect = 8.1
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +3
Query: 135 KRKCRAIKRER---YAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 305
KRK R ++ + + +K+ A ++++ ++EEK G + V + DA K+ +
Sbjct: 1269 KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRA 1328
Query: 306 LED--IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 410
+ED +E+ E+V + VD + K+ V K
Sbjct: 1329 IEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAK 1365
>AL138755-8|CAI14599.1| 1590|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1590
Score = 30.7 bits (66), Expect = 8.1
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Frame = +3
Query: 135 KRKCRAIKRER---YAVKELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKV 305
KRK R ++ + + +K+ A ++++ ++EEK G + V + DA K+ +
Sbjct: 1269 KRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRA 1328
Query: 306 LED--IEKDNEDVEMSSDDENVVVDSEGGKKRVFNTK 410
+ED +E+ E+V + VD + K+ V K
Sbjct: 1329 IEDGNLEEMEEEVRLKKRKRRRNVDKDPAKEDVEKAK 1365
>AB082532-1|BAC02710.1| 689|Homo sapiens KIAA2001 protein protein.
Length = 689
Score = 30.7 bits (66), Expect = 8.1
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +3
Query: 177 KELARLKKMLGVKDEEKPAGSEVMESEQVIFLDAGDLKKSKKVLEDIEKDNEDVEMSSDD 356
K + ++ + K+EE+ E M+ ++ + + K K+ E+I NE+ S D+
Sbjct: 484 KRMRAFQQEMKEKEEEEMKKEEEMKKKEEKEEEEEEEMKQKEEEEEIRNKNEEEGESKDE 543
Query: 357 ENVVVDSEGGKK 392
E+ D +GG+K
Sbjct: 544 ED--EDEDGGQK 553
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,003,503
Number of Sequences: 237096
Number of extensions: 1344631
Number of successful extensions: 4035
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 3758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4006
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12547615372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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