Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_M17
         (882 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0265 + 24040689-24041051,24041210-24041457,24041845-240423...    29   4.9  
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178           28   8.6  

>04_04_0265 +
           24040689-24041051,24041210-24041457,24041845-24042365,
           24042433-24042968
          Length = 555

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 11/43 (25%), Positives = 22/43 (51%)
 Frame = -3

Query: 154 AISVRSELRASASTTAEWRRAMSRSGACQHVSTRHAKILRNSL 26
           A+S+R+ELR     +A+W + M R     H +     ++ + +
Sbjct: 185 AMSLRNELRGPRQNSADWYKYMQRGAEAVHAANPRVVVILSGM 227


>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
          Length = 1143

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +2

Query: 95  PPPLGSCTRARSQLASHRNSS 157
           PP LGSC+R R   A H N S
Sbjct: 221 PPELGSCSRLRVLKAGHNNLS 241


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,467,938
Number of Sequences: 37544
Number of extensions: 379573
Number of successful extensions: 948
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)