Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_M17
         (882 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   1.6  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   4.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   6.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 232 KVVLLVMYGSISYVRLRMN 176
           K+VLL+ YGSI +   ++N
Sbjct: 20  KIVLLIFYGSIMFSMTQVN 38


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 167 GLTGCYFCEKRAESEREYNC 108
           G + C  C++R E +  Y+C
Sbjct: 270 GDSKCSLCQRRFEEQGNYSC 289


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 455 LVVLYNCYRT*PIT 496
           L +LYNC RT  IT
Sbjct: 168 LAILYNCKRTATIT 181


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,488
Number of Sequences: 438
Number of extensions: 4811
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)