Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_M15
         (1147 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_03_0023 - 7151465-7152111,7152222-7152405                           34   0.18 
01_01_0975 - 7686297-7686458,7687117-7687245,7687754-7687831,768...    30   3.9  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   5.2  
03_02_0514 + 9038606-9039790,9040211-9040432,9040548-9040655,904...    29   5.2  
06_01_0486 - 3455030-3455770                                           29   9.1  

>10_03_0023 - 7151465-7152111,7152222-7152405
          Length = 276

 Score = 34.3 bits (75), Expect = 0.18
 Identities = 20/65 (30%), Positives = 25/65 (38%)
 Frame = +3

Query: 900  PPLXHLXNPPXLSXXPXXPXXXXASAPRLRTXXXQSPSXPHXXXPXTLXAXPXPSPPLXX 1079
            PPL  +  PP +   P  P     + P L      +PS P    P T    P PS  +  
Sbjct: 171  PPLPLVPEPPNIGGVPIPPNPITPAPPSLVPPVFPTPSPPSILPPLT--PQPPPSSLIPP 228

Query: 1080 XXPLP 1094
              PLP
Sbjct: 229  VLPLP 233


>01_01_0975 -
           7686297-7686458,7687117-7687245,7687754-7687831,
           7688011-7688469,7690648-7690788,7691771-7692421
          Length = 539

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +1

Query: 442 VQPXTXAHXPPPLXXIXPPXXPXXXXXXHPPP 537
           V+P T A  PPP     PP  P       PPP
Sbjct: 359 VEPTTAAAPPPPSPHAQPPLLPVWPRHLAPPP 390


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 14/37 (37%), Positives = 14/37 (37%)
 Frame = +1

Query: 472 PPLXXIXPPXXPXXXXXXHPPPXXXVXFXXLXPLXPP 582
           PPL    P   P       PPP     F  L PL PP
Sbjct: 311 PPLPSFYPSPPPPPPPPPPPPPSFPWPFPPLAPLFPP 347


>03_02_0514 +
           9038606-9039790,9040211-9040432,9040548-9040655,
           9041608-9041802,9041905-9042153,9042525-9042672,
           9042673-9042779,9043311-9043475,9044506-9045948
          Length = 1273

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/44 (34%), Positives = 17/44 (38%)
 Frame = -3

Query: 581 GGXRGXRXXNXTXXXGGGWXXXXSXGXXGGXIXXRGGGXWAXVF 450
           GG  G          GGGW      G  GG     GGG W+ +F
Sbjct: 88  GGGFGGGAGGPLGGGGGGWGAGGGGGGGGGG---GGGGFWSRIF 128


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 14/47 (29%), Positives = 16/47 (34%)
 Frame = +1

Query: 448 PXTXAHXPPPLXXIXPPXXPXXXXXXHPPPXXXVXFXXLXPLXPPXT 588
           P    + PPP     PP  P       PPP        + P  PP T
Sbjct: 110 PYVPPYIPPPTPPYVPPPTPPSPPPYVPPPTPPSPPPYVPPPSPPAT 156


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,453,248
Number of Sequences: 37544
Number of extensions: 149770
Number of successful extensions: 666
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 631
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3479804408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)