Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_M07
         (834 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.7  
AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    23   8.7  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 12  TTHYREFLRF*VARLDAPSQLHNIYHD 92
           TT+  EF+ +  +++DA +Q+  IY D
Sbjct: 660 TTNLVEFVTYCTSQIDAGAQVDAIYTD 686


>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 12  TTHYREFLRF*VARLDAPSQLHNIYHD 92
           TT+  EF+ +  +++DA +Q+  IY D
Sbjct: 45  TTNLVEFVTYYTSQIDAGAQVDAIYTD 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.148    0.515 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 500,812
Number of Sequences: 2352
Number of extensions: 9458
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)