Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_M07
(834 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 37 0.015
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 37 0.015
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 37 0.015
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.33
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.3
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 3.1
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 3.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.1
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.1
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 4.5
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 29 5.4
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 5.4
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Frame = +3
Query: 384 GGPXPPXPXLGX----GXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPPXXXK 545
GGP PP P G G PPP PPP PPPPPP K
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +3
Query: 384 GGPXPPX--PXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
GGP PP P + G PPP G PPP PPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = +3
Query: 384 GGPXPPXPXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
GGP PP P G G PPP PPP PPPPPP
Sbjct: 756 GGPPPPPPPPG-GCPPP--------------PPPPPPGGFKGGPPPPPPP 790
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +3
Query: 390 PXPPXPXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
P PP + P G PPP PPPPPP
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPP 731
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/79 (25%), Positives = 20/79 (25%)
Frame = +2
Query: 476 PPPPXXNXXXXXXXXPPPPPXXXKXXXXXXXXXXXPPPGGGXFXXXKKXKXXXXXXXXPX 655
PPPP PPPPP PPPGG P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 656 XXXXXPXXXXXXXXXPPPP 712
P PPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Frame = +3
Query: 384 GGPXPPXPXLGX----GXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPPXXXK 545
GGP PP P G G PPP PPP PPPPPP K
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +3
Query: 384 GGPXPPX--PXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
GGP PP P + G PPP G PPP PPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = +3
Query: 384 GGPXPPXPXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
GGP PP P G G PPP PPP PPPPPP
Sbjct: 756 GGPPPPPPPPG-GCPPP--------------PPPPPPGGFKGGPPPPPPP 790
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +3
Query: 390 PXPPXPXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
P PP + P G PPP PPPPPP
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPP 731
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/79 (25%), Positives = 20/79 (25%)
Frame = +2
Query: 476 PPPPXXNXXXXXXXXPPPPPXXXKXXXXXXXXXXXPPPGGGXFXXXKKXKXXXXXXXXPX 655
PPPP PPPPP PPPGG P
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
Query: 656 XXXXXPXXXXXXXXXPPPP 712
P PPPP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 37.1 bits (82), Expect = 0.015
Identities = 21/58 (36%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Frame = +3
Query: 384 GGPXPPXPXLGX----GXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPPXXXK 545
GGP PP P G G PPP PPP PPPPPP K
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Score = 35.9 bits (79), Expect = 0.036
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 2/52 (3%)
Frame = +3
Query: 384 GGPXPPX--PXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
GGP PP P + G PPP G PPP PPPPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 32.7 bits (71), Expect = 0.33
Identities = 20/50 (40%), Positives = 20/50 (40%)
Frame = +3
Query: 384 GGPXPPXPXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
GGP PP P G G PPP PPP PPPPPP
Sbjct: 339 GGPPPPPPPPG-GCPPP--------------PPPPPPGGFKGGPPPPPPP 373
Score = 31.1 bits (67), Expect = 1.0
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +3
Query: 390 PXPPXPXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
P PP + P G PPP PPPPPP
Sbjct: 267 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPP 314
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/79 (25%), Positives = 20/79 (25%)
Frame = +2
Query: 476 PPPPXXNXXXXXXXXPPPPPXXXKXXXXXXXXXXXPPPGGGXFXXXKKXKXXXXXXXXPX 655
PPPP PPPPP PPPGG P
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGG--LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
Query: 656 XXXXXPXXXXXXXXXPPPP 712
P PPPP
Sbjct: 354 PPPPPPPGGFKGGPPPPPP 372
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 33.5 bits (73), Expect = 0.19
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 6/54 (11%)
Frame = +3
Query: 390 PXPPXPXLGXGX------PPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
P PP P LG PPP G PPP PPPPPP
Sbjct: 503 PPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +2
Query: 476 PPPPXXNXXXXXXXXPPPPPXXXKXXXXXXXXXXXPPPGGG 598
PPPP PPPPP PPP G
Sbjct: 505 PPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVG 545
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = +3
Query: 384 GGPXPPXPXLGXGXPP--PXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
GG PP P G PP P G F PPP P PP P
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +3
Query: 390 PXPPX----PXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPP 530
P PP P +G G PPP G + PPP PPPPP
Sbjct: 319 PPPPSRFGPPGMG-GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/120 (22%), Positives = 30/120 (25%), Gaps = 2/120 (1%)
Frame = +2
Query: 236 PPXKSKXKGXKXXPPFXXXXXPIPKKIXX*KPPXFFXPGRXKKXXXFFXXXPPXPPTXXG 415
PP + P P P PP PGR PP PP+ G
Sbjct: 267 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 326
Query: 416 XXXXXXXXXXXEKXXFF--FXXPPPPXXNXXXXXXXXPPPPPXXXKXXXXXXXXXXXPPP 589
+ PPPP PPPPP PPP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Frame = +3
Query: 384 GGPXPPXPXL---GXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXX---PPPPPP 533
G P PP P + G PPP + PPP PPPPPP
Sbjct: 332 GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/51 (35%), Positives = 20/51 (39%), Gaps = 4/51 (7%)
Frame = +3
Query: 390 PXPPX----PXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPP 530
P PP P +G G PPP G + PPP PPPPP
Sbjct: 329 PPPPSRFGPPGMG-GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/120 (22%), Positives = 30/120 (25%), Gaps = 2/120 (1%)
Frame = +2
Query: 236 PPXKSKXKGXKXXPPFXXXXXPIPKKIXX*KPPXFFXPGRXKKXXXFFXXXPPXPPTXXG 415
PP + P P P PP PGR PP PP+ G
Sbjct: 277 PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 336
Query: 416 XXXXXXXXXXXEKXXFF--FXXPPPPXXNXXXXXXXXPPPPPXXXKXXXXXXXXXXXPPP 589
+ PPPP PPPPP PPP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 6/56 (10%)
Frame = +3
Query: 384 GGPXPPXPXL---GXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXX---PPPPPP 533
G P PP P + G PPP + PPP PPPPPP
Sbjct: 342 GMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +2
Query: 476 PPPPXXNXXXXXXXXPPPPPXXXKXXXXXXXXXXXPPP 589
PPPP + PPPPP K PPP
Sbjct: 1344 PPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +3
Query: 390 PXPPXPXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
P PP P PPP PPP PPPPPP
Sbjct: 1354 PVPPPP------PPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +2
Query: 476 PPPPXXNXXXXXXXXPPPPPXXXKXXXXXXXXXXXPPP 589
PPPP + PPPPP PPP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPP 1380
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +3
Query: 390 PXPPXPXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPP 530
P PP P G G PPP G F PPP PPPP
Sbjct: 717 PAPPPP--GVGPPPPQGI--PPMGFDPNKPPPPMFQQGFNAGAPPPP 759
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/73 (30%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Frame = +3
Query: 384 GGPXPPXPXLGXGXPPPXGXGXKKXXFFFXXPPP---XXXXXXXXXXPPPPPPXXXKKXX 554
G P PP P G PP G G PPP PPPPP
Sbjct: 235 GSPPPPPP--PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Query: 555 XXXXXXXXXPPRG 593
PPRG
Sbjct: 293 RAGSPPPPPPPRG 305
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 396 PPXPXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPP 527
PP P G PPP G PPP PPP
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +2
Query: 476 PPPPXXNXXXXXXXXPPPPPXXXKXXXXXXXXXXXPPPG 592
PPPP + PPPPP PP G
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG 278
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/73 (30%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Frame = +3
Query: 384 GGPXPPXPXLGXGXPPPXGXGXKKXXFFFXXPPP---XXXXXXXXXXPPPPPPXXXKKXX 554
G P PP P G PP G G PPP PPPPP
Sbjct: 256 GSPPPPPP--PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Query: 555 XXXXXXXXXPPRG 593
PPRG
Sbjct: 314 RAGSPPPPPPPRG 326
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 396 PPXPXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPP 527
PP P G PPP G PPP PPP
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +2
Query: 476 PPPPXXNXXXXXXXXPPPPPXXXKXXXXXXXXXXXPPPG 592
PPPP + PPPPP PP G
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG 299
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/73 (30%), Positives = 22/73 (30%), Gaps = 3/73 (4%)
Frame = +3
Query: 384 GGPXPPXPXLGXGXPPPXGXGXKKXXFFFXXPPP---XXXXXXXXXXPPPPPPXXXKKXX 554
G P PP P G PP G G PPP PPPPP
Sbjct: 241 GSPPPPPP--PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Query: 555 XXXXXXXXXPPRG 593
PPRG
Sbjct: 299 RAGSPPPPPPPRG 311
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 396 PPXPXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPP 527
PP P G PPP G PPP PPP
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +2
Query: 476 PPPPXXNXXXXXXXXPPPPPXXXKXXXXXXXXXXXPPPG 592
PPPP + PPPPP PP G
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTG 284
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 387 GPXPPXPXLGXGXPPPXGXGXKKXXFFFXXPPP 485
GP PP G G PPP G + PPP
Sbjct: 722 GPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPP 754
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +3
Query: 387 GPXPPXPXLGXGXPPPXGXGXKKXXFFFXXPPP 485
GP PP G G PPP G + PPP
Sbjct: 722 GPPPPQQQRGYGYPPPPQPGHPYQQPYGQMPPP 754
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -3
Query: 547 FXXXXGGGGGGXXXXXXIXXXGGGXXKKKXXFFXPXPXGGGXPXPXXGXGGXG 389
F GGGGGG GGG P P GGG G GG G
Sbjct: 22 FPSAGGGGGGGGCGGGCGGGCGGGGGCAPP----PAPCGGGCGGGGGGCGGGG 70
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/53 (35%), Positives = 19/53 (35%)
Frame = -3
Query: 547 FXXXXGGGGGGXXXXXXIXXXGGGXXKKKXXFFXPXPXGGGXPXPXXGXGGXG 389
F GGGGGG GGG P P GGG G GG G
Sbjct: 22 FPSAGGGGGGGGCGGGCGGGCGGGGGCAPP----PAPCGGGCGGGGGGCGGGG 70
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 405 PXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
P PPP G G PPP PPPPPP
Sbjct: 212 PQAPPAPPPPIG-GIAPVNAHGAPPPPPLPPVGAGAPPPPPPP 253
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 405 PXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
P PPP G G PPP PPPPPP
Sbjct: 198 PQAPPAPPPPIG-GIAPVNAHGAPPPPPLPPVGAGAPPPPPPP 239
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 405 PXLGXGXPPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
P PPP G G PPP PPPPPP
Sbjct: 198 PQAPPAPPPPIG-GIAPVNAHGAPPPPPLPPVGAGAPPPPPPP 239
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = +3
Query: 390 PXPPXPXLGXGXPPPXGXGX---KKXXFFFXXPPPXXXXXXXXXXPPPPPP 533
P P P + PPP G PPP PPPPPP
Sbjct: 531 PRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPP 581
Score = 24.2 bits (50), Expect(2) = 4.5
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +3
Query: 516 PPPPPPXXXKKXXXXXXXXXXXPPRGGG 599
PPPPPP + PP GG
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGG 588
Score = 23.0 bits (47), Expect(2) = 4.5
Identities = 11/35 (31%), Positives = 12/35 (34%)
Frame = +3
Query: 426 PPPXGXGXKKXXFFFXXPPPXXXXXXXXXXPPPPP 530
PPP K+ PP PPPPP
Sbjct: 512 PPPAPGPHKEQRRSTSKDPPRPAPPPVSSIPPPPP 546
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 462 FFFXXPPPXXXXXXXXXXPPPPPP 533
FFF PPP PPPPP
Sbjct: 148 FFFDQPPPTPIPTPVPILEPPPPP 171
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/72 (26%), Positives = 21/72 (29%), Gaps = 4/72 (5%)
Frame = +3
Query: 396 PPXPXLGXGXPPPXGXGXKKXXF----FFXXPPPXXXXXXXXXXPPPPPPXXXKKXXXXX 563
PP P G G PPP G + PPP PP P
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNA 92
Query: 564 XXXXXXPPRGGG 599
PP+G G
Sbjct: 93 SRRPPPPPKGTG 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.148 0.515
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,893,766
Number of Sequences: 27780
Number of extensions: 272220
Number of successful extensions: 1654
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1142
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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