Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_M05
         (861 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97016-5|AAB52352.1|  196|Caenorhabditis elegans Hypothetical pr...    33   0.26 
Z72502-16|CAI46573.2|  409|Caenorhabditis elegans Hypothetical p...    29   5.6  
Z70782-12|CAI46574.2|  409|Caenorhabditis elegans Hypothetical p...    29   5.6  
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical pr...    28   7.4  
AC006637-1|AAK85476.2|  342|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr...    28   9.8  
U29244-18|AAC71099.2|  515|Caenorhabditis elegans Hypothetical p...    28   9.8  

>U97016-5|AAB52352.1|  196|Caenorhabditis elegans Hypothetical
           protein B0261.5 protein.
          Length = 196

 Score = 33.1 bits (72), Expect = 0.26
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +1

Query: 43  LIIYNCCITVIMFLVILYFHSFLCLHFEPSSAYRKRSSI 159
           L+++ C ITV++ ++ L F    CL  +PS + +K S +
Sbjct: 2   LLLFRCTITVVLPIIFLIFFVIGCLKKKPSQSKKKPSKV 40


>Z72502-16|CAI46573.2|  409|Caenorhabditis elegans Hypothetical
           protein C08B6.14 protein.
          Length = 409

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 25/73 (34%), Positives = 29/73 (39%)
 Frame = +2

Query: 257 HTAIPTVCNTTTQCMRDMRSMQKYHNSLGWGDIGYHFCVGGDGVAYEGRGWNVIGIHAGP 436
           H  I    N +TQ    + S +    +L      Y  CV GD   Y GR    I IH G 
Sbjct: 58  HVVILKNLNPSTQYYYQIDSRKFNFRTLPTDLTSYKVCVFGDLGVYNGRSTQSI-IHNGI 116

Query: 437 ANKLSIGICLIGD 475
           A K    I  IGD
Sbjct: 117 AGKFGF-IVHIGD 128


>Z70782-12|CAI46574.2|  409|Caenorhabditis elegans Hypothetical
           protein C08B6.14 protein.
          Length = 409

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 25/73 (34%), Positives = 29/73 (39%)
 Frame = +2

Query: 257 HTAIPTVCNTTTQCMRDMRSMQKYHNSLGWGDIGYHFCVGGDGVAYEGRGWNVIGIHAGP 436
           H  I    N +TQ    + S +    +L      Y  CV GD   Y GR    I IH G 
Sbjct: 58  HVVILKNLNPSTQYYYQIDSRKFNFRTLPTDLTSYKVCVFGDLGVYNGRSTQSI-IHNGI 116

Query: 437 ANKLSIGICLIGD 475
           A K    I  IGD
Sbjct: 117 AGKFGF-IVHIGD 128


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 444 LLAGPA*IPMTFHPRPSYATPSPPTQKWYPMSPQP 340
           +LA P     TF+P  + +T SPPT    P +P P
Sbjct: 458 VLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTP 492


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 444 LLAGPA*IPMTFHPRPSYATPSPPTQKWYPMSPQP 340
           +LA P     TF+P  + +T SPPT    P +P P
Sbjct: 458 VLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTP 492


>U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical
           protein C12D12.1b protein.
          Length = 648

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -1

Query: 444 LLAGPA*IPMTFHPRPSYATPSPPTQKWYPMSPQP 340
           +LA P     TF+P  + +T SPPT    P +P P
Sbjct: 458 VLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTPTP 492


>AC006637-1|AAK85476.2|  342|Caenorhabditis elegans Hypothetical
           protein F41B4.1 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 214 HKTSEQAGALCHYTSHRYSDCMQHHNPMYERYAKHAEIP 330
           +  ++ A +     SH  S  + H  P Y++Y +HA  P
Sbjct: 174 YSQNQSANSTLTRQSHSQSHTLPHQMPQYQQYHRHATPP 212


>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
           protein C09F9.2 protein.
          Length = 1642

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +2

Query: 155 LSVDFPVCSRDCWGAVPSKDTRPLNKPVPYVIIHHTAIPTVC 280
           LS D PVC R C G   +  +   + P  Y   +    P  C
Sbjct: 732 LSSDKPVCIRSCTGGKKATTSSASSAPASYTCTNEYRFPEGC 773


>U29244-18|AAC71099.2|  515|Caenorhabditis elegans Hypothetical
           protein ZK1248.1 protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 80  FLSFCIFIVFCAYTSSHPRLIEKDHLS--VDFPV 175
           F  F +FI+FC   +S P+ I ++H+    DF V
Sbjct: 7   FFIFSVFILFCTSKASLPKNIIQEHIKKHADFSV 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,652,631
Number of Sequences: 27780
Number of extensions: 376680
Number of successful extensions: 1161
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)