Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_M04
         (982 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      25   1.2  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    24   2.1  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    24   2.1  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.7  

>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 28  GIP*DLLFFLQLPSVVIGGSLTNKMSSKVSRDTLYECVNA 147
           G+P D   F+  P+V   GS+T+K  +   RD  YE  N+
Sbjct: 325 GMPNDFEEFVH-PTVAKRGSITSKNVANKIRDFYYEGPNS 363


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 28  GIP*DLLFFLQLPSVVIGGSLTNKMSSKVSRDTLY 132
           G+P D   F+  P+V   GS+T+K  +K  RD  Y
Sbjct: 323 GMPNDFEEFVH-PTVAKRGSITSKNVAKKIRDFYY 356


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 28  GIP*DLLFFLQLPSVVIGGSLTNKMSSKVSRDTLY 132
           G+P D   F+  P+V   GS+T+K  +K  RD  Y
Sbjct: 325 GMPNDFEEFVH-PTVAKRGSITSKNVAKKIRDFYY 358


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 906 PPPPXXPPPPXXPXPPP 956
           PP P  PP P  P  PP
Sbjct: 175 PPLPQVPPLPLPPIFPP 191



 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +2

Query: 677 PXPPPPXLPPXXPP 718
           P  PP  LPP  PP
Sbjct: 178 PQVPPLPLPPIFPP 191


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,789
Number of Sequences: 336
Number of extensions: 2745
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 27823477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)