Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_M04
(982 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein L10... 107 3e-24
SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein L10a... 106 4e-24
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.007
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.009
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.035
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.081
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.33
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.57
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.57
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.7
SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 28 2.3
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 4.0
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 7.1
SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor |S... 26 9.3
>SPBC30D10.18c |rpl102|rpl1-2, rpl10a-2|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 216
Score = 107 bits (256), Expect = 3e-24
Identities = 54/105 (51%), Positives = 62/105 (59%)
Frame = +2
Query: 161 SKDKKRNFLETVXLQIGLKNYDPXKDKRFSGTVKLKYIPRPKMQVCVLGDQXHCDXAKTL 340
S++KKRNF ETV LQIGLKNYDP +DKRFSGT+KL +PRP M +C+LGD D AK
Sbjct: 20 SEEKKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPNMSICILGDAHDLDRAKHG 79
Query: 341 NVPCMDAXAXXXXXXXXXXXXXXXXXXDAFLASXSLINQIPRLSG 475
V M DAF+AS LI QIPRL G
Sbjct: 80 GVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQIPRLLG 124
>SPCC1183.08c |rpl101|rpl1-1, rpl10a-1|60S ribosomal protein
L10a|Schizosaccharomyces pombe|chr 3|||Manual
Length = 216
Score = 106 bits (255), Expect = 4e-24
Identities = 54/105 (51%), Positives = 62/105 (59%)
Frame = +2
Query: 161 SKDKKRNFLETVXLQIGLKNYDPXKDKRFSGTVKLKYIPRPKMQVCVLGDQXHCDXAKTL 340
S++KKRNF ETV LQIGLKNYDP +DKRFSGT+KL +PRP M +C+LGD D AK
Sbjct: 20 SEEKKRNFTETVELQIGLKNYDPQRDKRFSGTIKLPNVPRPNMAICILGDAHDLDRAKHG 79
Query: 341 NVPCMDAXAXXXXXXXXXXXXXXXXXXDAFLASXSLINQIPRLSG 475
V M DAF+AS LI QIPRL G
Sbjct: 80 GVDAMSVDDLKKLNKNKKLVKKLAKKYDAFIASEVLIKQIPRLLG 124
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.3 bits (80), Expect = 0.007
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPP 962
P PPPP PP P PPPPP
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
Score = 33.9 bits (74), Expect = 0.035
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXP--XPPPPPXP 968
P PPP PPP P PPPPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.9 bits (69), Expect = 0.14
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 906 PPPPXXPPPPXXPXPPPPPXPSXP 977
PPPP PPPP P PP P P
Sbjct: 9 PPPP--PPPPGFEPPSQPPPPPPP 30
Score = 31.5 bits (68), Expect = 0.19
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 909 PPPXXPPPPXXPXPPPPPXPSXPP 980
PP PPPP P PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 906 PPPPXXPPPPXXPXPPPPPXPSXPP 980
PP PPPP PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 3.1
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 688 PPXPPPXLXPPXXPP 732
PP PPP PP PP
Sbjct: 11 PPPPPPGFEPPSQPP 25
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
Frame = +2
Query: 677 PXPPPPXL-PPXXPPP 721
P PPPP PP PPP
Sbjct: 11 PPPPPPGFEPPSQPPP 26
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
Frame = +2
Query: 902 PPXSPXXPSXP---XXPXSPPPPXP 967
PP +P P P P PPPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.9 bits (79), Expect = 0.009
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 872 PSXPPXXTXXPPXSPXXPSXPXXPXSPPPPXPLXPXP 982
P PP PP +P P+ P P +PPPP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGP--PSAPPPPLPASSAP 1741
Score = 35.1 bits (77), Expect = 0.015
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPPXPSXPP 980
P PPP PPPP P P P PS PP
Sbjct: 1707 PPPPPMSVPPPPSAP-PMPAGPPSAPP 1732
Score = 33.1 bits (72), Expect = 0.061
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPP--PPXPSXPP 980
P P PPPP PPP PP P+ PP
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 30.7 bits (66), Expect = 0.33
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPPXPSXPP 980
P P PP P PPPPP PP
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPP 1717
Score = 29.9 bits (64), Expect = 0.57
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 906 PPPPXXPPPPXXPXPPPPPXPSXPP 980
PP P PP P PPP PS PP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPP-PSAPP 1722
Score = 25.8 bits (54), Expect = 9.3
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 6/42 (14%)
Frame = +2
Query: 863 PXAPSXPPXXTXXPPXSPX----XPSXPXXPXSPP--PPXPL 970
P + + P PP P PS P P PP PP PL
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPL 1735
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.035
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 906 PPPPXXPPPPXXPXPPPPPXPSXPP 980
PPPP PP PPPPP P PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPP--PP 783
Score = 31.5 bits (68), Expect = 0.19
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Frame = +3
Query: 900 PXPPPP----XXPPPPXXPXPPPPPXPSXPP 980
P PPPP P P P PPP P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762
Score = 30.7 bits (66), Expect = 0.33
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPPXPS 971
P PPPP P PPPPP S
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVS 786
Score = 30.3 bits (65), Expect = 0.43
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXP---XPPPPPXP 968
P P P P PP P PPPPP P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 30.3 bits (65), Expect = 0.43
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPP 962
P PPPP P PPPPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPP 782
Score = 29.1 bits (62), Expect = 1.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPP 962
P P PP P P PPPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPP 768
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.081
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +2
Query: 863 PXAPSXPPXXTXXPPXSPXXPSXPXXPXSPPPPXPLXPXP 982
P AP PP PP P+ P P + P P P P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP-APAP 482
Score = 30.3 bits (65), Expect = 0.43
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +2
Query: 863 PXAPSXPPXXTXXPPXSPXXPSXPXXPXSPPPPXPLXPXP 982
P P P PP +P P P + PP P P P
Sbjct: 437 PSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 29.9 bits (64), Expect = 0.57
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +2
Query: 869 APSXPPXXTXXPPXSPXXPSXPXXPXSPPPPXPLXPXP 982
AP+ PP +P P+ P P S PP P P
Sbjct: 400 APALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPP 437
Score = 29.9 bits (64), Expect = 0.57
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +3
Query: 900 PXPPPPXXPP--PPXXPXPPPPPXPSXPP 980
P P PP PP PP P PP P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Score = 29.1 bits (62), Expect = 1.0
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPPXPS 971
P P P PP P PPP P P+
Sbjct: 460 PAGMPAAPPLPPAAPAPPPAPAPA 483
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 6/33 (18%)
Frame = +3
Query: 900 PXPPPP------XXPPPPXXPXPPPPPXPSXPP 980
P PPPP P PP PPPP P P
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 27.5 bits (58), Expect = 3.1
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 906 PPPPXXPPPPXXPXPPPPPXPSXP 977
P P PP P P P P P+ P
Sbjct: 464 PAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPPXPS 971
P PP P P PPP P PS
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPS 260
Score = 26.2 bits (55), Expect = 7.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 906 PPPPXXPPPPXXPXPPPPPXPSXP 977
P PP PPP PP P P
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 26.2 bits (55), Expect = 7.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 677 PXPPPPXLPPXXPP 718
P P PP LPP PP
Sbjct: 416 PVPTPPSLPPSAPP 429
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Frame = +2
Query: 863 PXAPSXPP-XXTXXPPXSPXXPSXPXXPXSPPPPXPLXP 976
P PS PP PP +P PS P + PP P P
Sbjct: 418 PTPPSLPPSAPPSLPPSAP--PSLPMGAPAAPPLPPSAP 454
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Frame = +3
Query: 906 PPPPXXPP--PPXXPXPP-PPPXPSXPP 980
PP P P PP P P PPP P+ P
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 30.7 bits (66), Expect = 0.33
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = +3
Query: 900 PXPPPPXXPPPPXX-PXPPPPPXPSXPP 980
P PP P P PPPPP P+ PP
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 24.2 bits (50), Expect(2) = 0.81
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 948 PPPPPXPSXPP 980
PPPP PS PP
Sbjct: 273 PPPPATPSQPP 283
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +3
Query: 909 PPPXXPPPPXXPXPPPPPXPSXPP 980
P P PPPP PP S P
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLP 257
Score = 23.4 bits (48), Expect(2) = 0.81
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPP 962
P PPPP PP P P
Sbjct: 239 PPPPPPTLPPQSTNTSQLPMP 259
Score = 23.0 bits (47), Expect(2) = 1.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 906 PPPPXXPPP 932
PPPP PPP
Sbjct: 189 PPPPPPPPP 197
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.57
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = +2
Query: 872 PSXPPXXTXXPPXSPXXPS--XPXXPXSPPPPXPLXP 976
P+ P PP +P PS P P PPPP P
Sbjct: 174 PAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Frame = +3
Query: 909 PPPXXPPPPXXPXPPP---PPXPSXPP 980
PP PP P P P P PP PS P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAP 165
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = +2
Query: 863 PXAPSX--PPXXTXXPPXSPXXPSXPXXPXSPPPPXPLXPXP 982
P PS PP P SP PS P P + PP P P P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSP--PSAPSLPSAVPPMPPKVPPP 204
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPP 959
P PPPP P P P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = +3
Query: 906 PPPPXXPPPPXXPXPPP---PPXPSXPP 980
PP PP P PP PP PS PP
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPP 151
Score = 27.5 bits (58), Expect = 3.1
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Frame = +3
Query: 906 PPPPXXPPPPXXPXPP---PPPXPSXP 977
PP P PPP P P PP PS P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLP 191
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 5/30 (16%)
Frame = +3
Query: 906 PPPPXXPPPPXXPXPP-----PPPXPSXPP 980
PP P PPP PP PP S PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.57
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +3
Query: 900 PXPPPPXXP--PPPXXPXPPPPPXPSXPP 980
P PPP P P P PP PP + PP
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 27.1 bits (57), Expect = 4.0
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +2
Query: 869 APSXPPXXTXXPPXSPXXPSXPXXPXSPPPPXP--LXPXP 982
APS PP P S PS P +PP P P + P P
Sbjct: 1059 APSAPPPV---PAPSSEIPSIPAPSGAPPVPAPSGIPPVP 1095
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPPXPSXP 977
P PP P P P P PP P+ P
Sbjct: 120 PGEPPLPDEPVPEEPLPGEPPLPNEP 145
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPPXPSXP 977
P PP P P P P PP P P
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEP 129
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPPXPSXPP 980
P P P PP P P P P P PP
Sbjct: 99 PEEPLPREPPLPNEPV-PEEPLPGEPP 124
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPPXPSXPP 980
P P P PP P P P P P PP
Sbjct: 115 PEEPLPGEPPLPDEPV-PEEPLPGEPP 140
>SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 707
Score = 27.9 bits (59), Expect = 2.3
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = -2
Query: 216 FRPI*SXTVSKKLRFLSLEELKNGIHALVERVTRHFRRHFV---CQRTTYHNAWQL*KKK 46
F PI S +V + + + ++ GI+ + +R TR +R + Q+ H KKK
Sbjct: 625 FAPIDSDSVEQFAQTIDWQQTPLGIYVVTQRQTREEQRKLIRESVQQDQEHKEQMRQKKK 684
Query: 45 QILRN 31
Q L++
Sbjct: 685 QALKS 689
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 906 PPPPXXPPPPXXPXPPPPPXPSXP 977
P PP PP P PP P P P
Sbjct: 492 PLPPTTFAPPGVPLPPIPGAPGMP 515
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 900 PXPPPPXXPPPPXXPXPPPPPXPSXPP 980
P PP P P PPPP S P
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISP 755
>SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1052
Score = 25.8 bits (54), Expect = 9.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 1 TXQLPISL*GI-P*DLLFFLQLPSVVIGGSLTNKMSSKVSRDTLYEC 138
T LP L I P DLLF+ L ++ G + + + S++ LY+C
Sbjct: 647 TLLLPKDLANIQPSDLLFYAVLLVLINGKLVLLSLKKQHSKELLYQC 693
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,197,122
Number of Sequences: 5004
Number of extensions: 37632
Number of successful extensions: 634
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 505288058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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