Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_M01
         (1074 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   2.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   2.3  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   3.0  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   9.3  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 437 PPXXXVPPPPSPPXXP 484
           PP   VPP P PP  P
Sbjct: 175 PPLPQVPPLPLPPIFP 190


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 215 PSPVTPLSVISNSVSCAHPYPLRN 144
           PSP T  SV S SVS A PY L++
Sbjct: 702 PSPST--SVASPSVSVASPYMLQS 723


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 215 PSPVTPLSVISNSVSCAHPYPLRN 144
           PSP T  SV S SVS A PY L++
Sbjct: 594 PSPST--SVASPSVSVASPYMLQS 615


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 461 PPSPPXXPXPPXXXKPPPPPP 523
           PP+P   P      KP PP P
Sbjct: 250 PPTPKPRPTKVSRRKPRPPRP 270


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 21.8 bits (44), Expect = 9.3
 Identities = 9/32 (28%), Positives = 11/32 (34%)
 Frame = +3

Query: 438 PPPXXFPXPXRPPXFPXRRXXXNPPXPXPPXP 533
           PP    P P R       +   +P  P  P P
Sbjct: 72  PPKREIPSPKRSSPILAEKVSVSPTTPPTPSP 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,132
Number of Sequences: 336
Number of extensions: 2584
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 30826003
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)