Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_L23
(948 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 37 0.020
02_04_0382 - 22501041-22501279,22501717-22501810 35 0.082
03_06_0471 + 34169562-34169892,34170121-34170347 33 0.44
06_03_0253 + 18753901-18754278,18754873-18754968,18755167-187553... 31 1.8
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 30 3.1
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 4.1
04_04_0198 + 23502657-23502900,23505228-23505298,23505690-235057... 29 4.1
01_01_0082 + 625198-625719 29 7.1
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 37.1 bits (82), Expect = 0.020
Identities = 24/63 (38%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +1
Query: 184 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDPPQGRPYFKPTPFPG 354
QP Y P + P V PP Y P +G P N + Y +PP GRP P P G
Sbjct: 387 QPEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYG 445
Query: 355 ARG 363
A G
Sbjct: 446 AGG 448
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 35.1 bits (77), Expect = 0.082
Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 100 KFFMIFVLALLA--MANAQVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNG 273
K ++F L L A +A+A+ +D D P +E P +PP P+ +
Sbjct: 11 KALLVFALLLAAAFVASAEQTHDDGD----NPPESPDHEDPPPSPEYYDPP----PSPDY 62
Query: 274 YEPIDNGAYYVDPPQGRPYFKPTPFPGARGG 366
Y+P + YY DPP Y+ P P P GG
Sbjct: 63 YDPPHSPDYY-DPPPSPDYYDPPPSPYYGGG 92
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 32.7 bits (71), Expect = 0.44
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 205 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG---RPYFKPTPFPG 354
Y P P PP Y P+ GY P GAY PP G +P + P +PG
Sbjct: 56 YPPAGGYPGAQYPPSGYPPSQGGYPP---GAY---PPSGYPQQPGYPPAGYPG 102
>06_03_0253 +
18753901-18754278,18754873-18754968,18755167-18755376,
18756028-18756093,18756379-18756576,18756616-18756810,
18756968-18757014,18757147-18757234,18757331-18757681,
18758593-18759123
Length = 719
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 165 VIDHNLSVGHSQQSEDENHEEF-HFYMITSYHRRKILKLCQNLK 37
V+DH S H+ SE+ + F+ SY R ++L+LCQN++
Sbjct: 210 VLDHGESNEHTFTSEEVHQPGIPSFHQRISYTRDQLLQLCQNVE 253
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 29.9 bits (64), Expect = 3.1
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +1
Query: 223 RPYIVNP---PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKP 339
+PY P P P G Y P G Y PP+G+P + P
Sbjct: 266 QPYPPKPQGQPYPPQPQGQPYPPQPYGQTYPPPPKGQPTYPP 307
Score = 29.1 bits (62), Expect = 5.4
Identities = 21/65 (32%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
Frame = +1
Query: 166 PDPFFAQPTVGNGYEPI-DNRPYIVNPPKDY---NPNGNGYEPIDNGAYYVDPPQGRPYF 333
P P+ QP G Y P Y P ++ P Y P G Y PQG+PY
Sbjct: 229 PQPYPPQPQ-GQTYPPQPQGETYQPQPQRETYPPQPQVQPYPPKPQGQPYPPQPQGQPY- 286
Query: 334 KPTPF 348
P P+
Sbjct: 287 PPQPY 291
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +1
Query: 211 PIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 351
P + P IV P Y P+ YEP Y +PP PY P FP
Sbjct: 636 PYPSPPDIVPSPPSYEPSPPSYEP-SPPEYAPEPPVYAPY-PPGIFP 680
>04_04_0198 +
23502657-23502900,23505228-23505298,23505690-23505727,
23505905-23507693
Length = 713
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +1
Query: 187 PTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPG 354
P++ NG P+ + PP P+ NGA PP G P P PG
Sbjct: 638 PSMANGAGPVPPPIAVAPPPAPPIAGAAPPPPMANGAAAAAPPGGNPAPPAGPQPG 693
>01_01_0082 + 625198-625719
Length = 173
Score = 28.7 bits (61), Expect = 7.1
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 187 PTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPF-PGARG 363
P G GY P + NP YNP +G+ N Y+ PP G Y + F P A
Sbjct: 97 PYGGGGYNPTPS----YNPTPGYNPTPSGWFTPPNMPSYLTPP-GTLYPQDPGFRPNAAA 151
Query: 364 G 366
G
Sbjct: 152 G 152
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,563,448
Number of Sequences: 37544
Number of extensions: 342692
Number of successful extensions: 805
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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