Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_L16
(902 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 36 0.008
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 35 0.018
SPAPB1A11.01 ||SPAPB24D3.11|membrane transporter|Schizosaccharom... 33 0.073
SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch... 33 0.073
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom... 32 0.097
SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 32 0.13
SPBPB2B2.16c |||MFS family membrane transporter |Schizosaccharom... 32 0.13
SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|ch... 32 0.13
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 29 0.90
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 28 2.1
SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr 3|||M... 28 2.1
SPAC18G6.09c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 2.8
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 26 6.4
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +2
Query: 581 LTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELF 760
L++ K + S ++ A G +AD +GRKR+L+ + + V + S+N +
Sbjct: 117 LSSGQKELITSATSFAALISATTSGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMM 176
Query: 761 MFFRFVNGAALG 796
+ RF+ G +G
Sbjct: 177 VVGRFIVGYGIG 188
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 34.7 bits (76), Expect = 0.018
Identities = 20/73 (27%), Positives = 36/73 (49%)
Frame = +2
Query: 578 DLTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYEL 757
+LT K ++ S +G ++G G++AD GRK V+ SI+ + + + +
Sbjct: 123 ELTNGGKEFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWH 182
Query: 758 FMFFRFVNGAALG 796
+ RFV G +G
Sbjct: 183 MIVGRFVIGWGVG 195
>SPAPB1A11.01 ||SPAPB24D3.11|membrane
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 495
Score = 32.7 bits (71), Expect = 0.073
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +2
Query: 611 SIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNGAA 790
++ IG+M+G + +++ GR+ + I + AL + ++ S N +F+ FRF +G
Sbjct: 82 TLYVIGVMLGPLIFSPLSELYGRRPLNIFGYTLFALMQIPTALSVNLAMFVVFRFFSG-F 140
Query: 791 LGRVG 805
G VG
Sbjct: 141 FGSVG 145
>SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 32.7 bits (71), Expect = 0.073
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Frame = +2
Query: 581 LTTQTKGWLNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELF 760
L++Q S+ +G+ +G G ++D LGRK V I I+ ++ + ++NY
Sbjct: 114 LSSQVSLLGQSMFVLGVALGPLFLGPLSDLLGRKLVYIGSLIIYVCFCISCALARNYAQL 173
Query: 761 MFFRFVNG----AALGRVGTCDLVVISXXSSRKKTWGHVEF 871
+ + G ALG V V+ S WG F
Sbjct: 174 VISMLIMGVVGSTALGNVAGAVADVLGDEDS---NWGMYMF 211
>SPBC1271.09 |||glycerophosphodiester
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 543
Score = 32.3 bits (70), Expect = 0.097
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +2
Query: 605 LNSIIFIGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYE--------LF 760
+ I ++G +VG ++G +D GRK +I +I+ ++ + + Y+
Sbjct: 120 IGMIAYVGTIVGQLSFGWYSDRFGRKNGMITATIILIVSTALCTGAYGYKGSINGMLSAL 179
Query: 761 MFFRFVNGAALGRVGTCDLVVISXXSSRKKT 853
+ +RF G +G C V S S+ K+
Sbjct: 180 IAYRFFLGIGIGAEYPCGSVAASESSNELKS 210
>SPBC1348.05 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 485
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 623 IGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNGAALGRV 802
+G++ G + +++ GR+ + + V AL + + S N +F+ FRF +G G V
Sbjct: 89 LGILFGNLIFAPLSEQFGRRPIYLIGYSVFALLQIPIALSVNLAMFLVFRFFSG-LFGSV 147
Query: 803 G 805
G
Sbjct: 148 G 148
>SPBPB2B2.16c |||MFS family membrane transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 485
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 623 IGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNGAALGRV 802
+G++ G + +++ GR+ + + V AL + + S N +F+ FRF +G G V
Sbjct: 89 LGILFGNLIFAPLSEQFGRRPIYLIGYSVFALLQIPIALSVNLAMFLVFRFFSG-LFGSV 147
Query: 803 G 805
G
Sbjct: 148 G 148
>SPAC750.02c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 623 IGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFFRFVNGAALGRV 802
+G++ G + +++ GR+ + + V AL + + S N +F+ FRF +G G V
Sbjct: 89 LGILFGNLIFAPLSEQFGRRPIYLIGYSVFALLQIPIALSVNLAMFLVFRFFSG-LFGSV 147
Query: 803 G 805
G
Sbjct: 148 G 148
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 29.1 bits (62), Expect = 0.90
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +2
Query: 623 IGMMVGAYAWGSVADSLGRKRVLIAISIVNALAIVASSFSQNYELFMFF 769
+G++VGA W AD++GR+ + + V + S N+ F
Sbjct: 129 LGLLVGAMVWSLSADTIGRRWAFNLTFLFTGVFAVIAGASPNFASICVF 177
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2
Query: 35 P*DLTLLRECLQHRLLVLSSPHLTRTVHSHLKWRNAH 145
P DL L R L+H LL S L + + S LKWRN H
Sbjct: 360 PPDLQL-RCALRHELL---SAGLQKAIDSLLKWRNRH 392
>SPCC188.09c |||glycoprotein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 609
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 129 SGGTLTNNKEEAHQIVTGKLYAVGSATTPSERRLSVPA-TTIQS 257
+GGT+TN E Q +T L A S T P + +P +TI S
Sbjct: 324 TGGTVTNTVYEGSQTITSTL-ATASGTVPGTVEVILPGPSTIYS 366
>SPAC18G6.09c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 312
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 440 KSAFSELEPFSGSDFDFLTEGTTPSSAVLEPGPFSCRSPFTSQL 309
KS S + SG+D F + ++ ++++L GP SP S L
Sbjct: 129 KSVSSYVSNSSGADRSFSSNSSSDTNSILYAGPTFTHSPAASNL 172
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 26.2 bits (55), Expect = 6.4
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 313 CDVKGDLQLNGPGSKTAELGVVPSVKKSKSDPEKG-SNSEKADFERAIELT 462
CD L+ GSK+ K++ P K +N+E D +RAIEL+
Sbjct: 222 CDSCYSLRTKPKGSKSRARNERKFHAKTRKTPSKPVTNNEDEDIKRAIELS 272
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,604,484
Number of Sequences: 5004
Number of extensions: 75253
Number of successful extensions: 201
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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