Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_L13
         (1354 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.         33   3.1  
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.        33   3.1  
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.     33   3.1  

>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
          Length = 1250

 Score = 32.7 bits (71), Expect = 3.1
 Identities = 17/57 (29%), Positives = 18/57 (31%)
 Frame = -3

Query: 986 PPPPXPPAGGXXXXARPGXCXGXRTHXLXHHPXLXHAXXXXHXXAXPGTPPTPPXXP 816
           PPPP P  G      +P  C           P L            P TPP PP  P
Sbjct: 714 PPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIP 770


>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
          Length = 1250

 Score = 32.7 bits (71), Expect = 3.1
 Identities = 17/57 (29%), Positives = 18/57 (31%)
 Frame = -3

Query: 986 PPPPXPPAGGXXXXARPGXCXGXRTHXLXHHPXLXHAXXXXHXXAXPGTPPTPPXXP 816
           PPPP P  G      +P  C           P L            P TPP PP  P
Sbjct: 714 PPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIP 770


>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
          Length = 1236

 Score = 32.7 bits (71), Expect = 3.1
 Identities = 17/57 (29%), Positives = 18/57 (31%)
 Frame = -3

Query: 986 PPPPXPPAGGXXXXARPGXCXGXRTHXLXHHPXLXHAXXXXHXXAXPGTPPTPPXXP 816
           PPPP P  G      +P  C           P L            P TPP PP  P
Sbjct: 700 PPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIP 756


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,676,526
Number of Sequences: 237096
Number of extensions: 635367
Number of successful extensions: 9418
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7945
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 19566860838
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)