Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_L11
         (1088 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    32   0.026
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    29   0.18 
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    27   0.98 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   2.3  
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   3.0  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   9.1  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 32.3 bits (70), Expect = 0.026
 Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
 Frame = +3

Query: 555 PHRXXPCHSPXPSTRAPSTRANPPXSHXXFLPSRXRXX---PXPXHLPXPLPPQXXPPXA 725
           P R  P   P P    P     PP +     P   R     P P  +P P+ PQ  PP A
Sbjct: 178 PARPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQ-MPPGA 236

Query: 726 LP 731
           +P
Sbjct: 237 VP 238



 Score = 29.9 bits (64), Expect = 0.14
 Identities = 25/95 (26%), Positives = 36/95 (37%)
 Frame = +3

Query: 537 PNQRDXPHRXXPCHSPXPSTRAPSTRANPPXSHXXFLPSRXRXXPXPXHLPXPLPPQXXP 716
           P Q+  PH+     +  P   AP +   PP +H     +     P P  +P P P    P
Sbjct: 140 PQQQQHPHQRDTGPALFP---APISHRPPPIAHQQAPFAMDPARPNPG-MP-PGPQMMRP 194

Query: 717 PXALPPPHLXXXXPPXXPRFPXPXTLXPXXXXXPV 821
           P  + PP       P  P+ P P  + P     P+
Sbjct: 195 PGNVGPPR---TGTPTQPQPPRPGGMYPQPPGVPM 226


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 0.18
 Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
 Frame = -2

Query: 784 GXGKRGXXGGXXXXRWGGGSAXG-GXXXGGRGXGRWXGXGXXRXREG 647
           G G  G  GG    R G G   G G   GGR  G   G G    R G
Sbjct: 58  GGGDDGYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGGGGYGDRNG 104



 Score = 28.7 bits (61), Expect = 0.32
 Identities = 14/32 (43%), Positives = 14/32 (43%)
 Frame = -2

Query: 769 GXXGGXXXXRWGGGSAXGGXXXGGRGXGRWXG 674
           G  GG      GGG    G   GGRG GR  G
Sbjct: 55  GGYGGGDDGYGGGGRGGRGGRGGGRGRGRGRG 86


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 27.1 bits (57), Expect = 0.98
 Identities = 16/53 (30%), Positives = 19/53 (35%)
 Frame = +1

Query: 580 PXGHQHAPPQPVPTXXXXTAXFFPPAXXXXPXHXIXPHPSPXXXPHRWRSHPP 738
           P  +QH PP P       ++    PA      H   P  SP    H   S PP
Sbjct: 29  PSNYQHQPPHPQFIGDGESSP--QPAMYYPHPHVFHPQSSPDWSSHENFSTPP 79


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.8 bits (54), Expect = 2.3
 Identities = 16/52 (30%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
 Frame = +3

Query: 615 ANPPXSHXXFLPSRXRXXPXPXHLPXP--LPPQXXPPXA-LPPPHLXXXXPP 761
           A PP  +    P      P P  +P     PP    P   LPPP +    PP
Sbjct: 69  AGPPKPNISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPP 120


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 3.0
 Identities = 9/29 (31%), Positives = 11/29 (37%)
 Frame = +1

Query: 700 PXXXPHRWRSHPPIXXLXXLPPTPAFXPP 786
           P   PH W        +   PP P + PP
Sbjct: 356 PTYWPHYWNRFTQSTAMHNQPPPPPYQPP 384


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 9.1
 Identities = 15/52 (28%), Positives = 20/52 (38%)
 Frame = +3

Query: 534 PPNQRDXPHRXXPCHSPXPSTRAPSTRANPPXSHXXFLPSRXRXXPXPXHLP 689
           PP++R+   R        PS R+P  R     +     P R R    P  LP
Sbjct: 251 PPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTRPTSWP-RSRPTSKPKRLP 301


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,726
Number of Sequences: 2352
Number of extensions: 9636
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 122096403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)