Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_L09
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0156 - 1233431-1233925                                           30   2.1  
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     30   2.8  
04_03_0278 - 13761999-13762462,13762628-13762727,13763065-137632...    29   6.4  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.4  
06_03_0218 + 18219956-18220555                                         28   8.4  
03_06_0149 - 31987183-31987630,31987813-31987874                       28   8.4  
03_04_0061 - 16949038-16950006                                         28   8.4  

>08_01_0156 - 1233431-1233925
          Length = 164

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
 Frame = -2

Query: 790 SCTQAQLGANDLHRTEIPTA*AMRKRHASRREK--GGQVSGKRQGRNRRAHEGASRGKRL 617
           S T   LG  D   TE+  A A     A+R E+  GG   G R G   RA +   +G   
Sbjct: 83  SPTATALGDADATATEVDAAAAAEAEAAARGERGDGGGDGGGRAGGRGRARDEREKGAAA 142

Query: 616 VSL*SCRVSPPLT 578
             +   R SP ++
Sbjct: 143 DRVLGVRASPTVS 155


>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 634 SRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 515
           SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 25  SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>04_03_0278 -
           13761999-13762462,13762628-13762727,13763065-13763289,
           13763347-13763415,13763605-13764432,13764706-13764779,
           13818821-13818905
          Length = 614

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 780 CVHEPPFXPTAAPYPVLSS*VXPGRPT 860
           C H PP  P   P P+ S  + PG PT
Sbjct: 567 CRHRPPSKPLPPPPPLPSKPLLPGLPT 593


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 298 NESAN---ARGEAVCVLGALPLPRSLTRCAR 381
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -2

Query: 706 SRREKGGQVSG--KRQGRNRRAHEGASRGKRLVS 611
           +RRE+  + +G  KR+GR R    G  RGKR  S
Sbjct: 106 ARRERRLEAAGAEKREGRRRGGSSGGLRGKRRAS 139


>03_06_0149 - 31987183-31987630,31987813-31987874
          Length = 169

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 727 AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRG 626
           A+ + H   R +   +  +R+GR R AHEG   G
Sbjct: 76  AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIG 109


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 601 RTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGA 717
           RT+K PG+   ++PRA+  + P  Y   VR +   +R A
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSA 293


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,084,499
Number of Sequences: 37544
Number of extensions: 475433
Number of successful extensions: 1510
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)