Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_L05
         (972 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0572 - 18632485-18632975,18633330-18633646,18633885-18634435     29   7.4  
02_03_0106 + 15292869-15296138                                         28   9.8  

>09_04_0572 - 18632485-18632975,18633330-18633646,18633885-18634435
          Length = 452

 Score = 28.7 bits (61), Expect = 7.4
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +2

Query: 176 VXGEQFKGXRRKFSKGTLNTWAVDIRMVKPSSPERL 283
           + G +    R ++S+G+L  W VD  + +PS+ ++L
Sbjct: 405 ISGLEIDNVRMRWSRGSLKGWDVDPLLFQPSTVDKL 440


>02_03_0106 + 15292869-15296138
          Length = 1089

 Score = 28.3 bits (60), Expect = 9.8
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +3

Query: 72  WLSKQSPNNXSKLVAKSRKSQKSQNGLTGP 161
           W     P N  KLV K+ +  K  N LTGP
Sbjct: 782 WNELTPPQNIEKLVIKNYRGGKFPNWLTGP 811


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,989,713
Number of Sequences: 37544
Number of extensions: 225920
Number of successful extensions: 566
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2823252340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)