Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_K13
         (939 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899...    29   5.3  
07_03_0409 + 17817046-17817126,17818320-17818523,17818744-178188...    29   7.1  

>05_05_0155 +
           22787658-22787930,22788029-22788096,22789600-22789915,
           22790207-22790323
          Length = 257

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 747 PHHXSPPXXPHPP 785
           PHH  PP  PHPP
Sbjct: 51  PHHPHPPHHPHPP 63



 Score = 29.1 bits (62), Expect = 5.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 747 PHHXSPPXXPHPP 785
           PHH  PP  PHPP
Sbjct: 57  PHHPHPPHHPHPP 69



 Score = 29.1 bits (62), Expect = 5.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 747 PHHXSPPXXPHPP 785
           PHH  PP  PHPP
Sbjct: 63  PHHPHPPHHPHPP 75


>07_03_0409 +
           17817046-17817126,17818320-17818523,17818744-17818856,
           17819446-17819491,17819741-17819787,17820250-17820325,
           17820865-17820937,17821059-17821204,17821382-17821467,
           17821734-17821873,17821944-17822083,17822171-17822221,
           17823644-17823702,17823793-17823949,17824793-17824845,
           17824936-17825034,17825876-17825990,17826075-17826197,
           17826417-17826584
          Length = 658

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 9/20 (45%), Positives = 16/20 (80%)
 Frame = -2

Query: 62  RYKVEYKISNLRVPYNXRGG 3
           +Y+ ++K+ NL++PYN R G
Sbjct: 345 KYREDFKLPNLKIPYNNRLG 364


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,163,759
Number of Sequences: 37544
Number of extensions: 199971
Number of successful extensions: 402
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 402
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2694390200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)