Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_K12
(876 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces p... 256 2e-69
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 49 1e-06
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 37 0.003
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 30 0.50
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 29 0.87
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 29 1.1
SPCC1442.09 |trp3||anthranilate synthase component I|Schizosacch... 28 1.5
SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyce... 28 2.0
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 3.5
SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomy... 26 6.1
SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|... 26 8.1
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 26 8.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 8.1
>SPCC777.05 |gtr2||Gtr1/RagA G protein Gtr2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 314
Score = 256 bits (628), Expect = 2e-69
Identities = 125/209 (59%), Positives = 159/209 (76%), Gaps = 1/209 (0%)
Frame = +1
Query: 229 KPR-ILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPG 405
KPR I+LMGLRRSGKSSIQKVVF+KM PNETLFLEST+++ +D I SSF+ F +WDFPG
Sbjct: 2 KPRKIILMGLRRSGKSSIQKVVFYKMPPNETLFLESTSKLTQDHI--SSFIDFSVWDFPG 59
Query: 406 QIDFFDPTFDSDTIFGGCGALVFVIDAQDDYQDALDKLQLTVTKAYRVNSNIKFEVFIHK 585
Q+D FD FD ++IF GAL+FVIDAQDDY DAL +L +TV + +N NI EVFIHK
Sbjct: 60 QVDVFDAAFDFESIFTQVGALIFVIDAQDDYLDALARLHVTVARVVTINPNICIEVFIHK 119
Query: 586 VDGLNDDYKMESQRDIHHRATDDLAEAGLHHVHLSFHLTSIYDHSIFESI*QSSPKANTS 765
VDGL+D++K+++QRDI R D+LA+ GL +V +SFHLTSI+DHSIFE+ + K
Sbjct: 120 VDGLSDEFKIDTQRDIQQRTQDELADIGLENVPISFHLTSIFDHSIFEAFSRVIQKLIPQ 179
Query: 766 VAYIRKSXNILISNSGIEKAFLFDVVSKI 852
+ + NI SNS +EKA+LFDV+SKI
Sbjct: 180 LPTLENLLNIFCSNSLVEKAYLFDVLSKI 208
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 48.8 bits (111), Expect = 1e-06
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Frame = +1
Query: 229 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 408
+ ++LLMG SGKSS++ +VF +T L +T I + + +WD GQ
Sbjct: 2 RKKVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLVLNLWDCGGQ 61
Query: 409 IDFFDPTFDS--DTIFGGCGALVFVIDAQD-DYQDALDKLQLTVTKAYRVNSNIKFEVFI 579
F + + D IF L++V D + +++ L + + + + I
Sbjct: 62 EAFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVANSPQARVFCLI 121
Query: 580 HKVDGLNDDYK---MESQRDIHHRATDDLAEAGLHHVHLSFHLTSIYDHSIFES 732
HK+D + +D + E ++ I + DL L TSI+D ++F++
Sbjct: 122 HKMDLVQEDLRDLVFEERKAILLETSKDLETTCL--------ATSIWDETLFKA 167
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 728 KAFSKVVQKLIPQLPTLEN 784
KA+S +V LIP PTLE+
Sbjct: 166 KAWSAIVYTLIPNTPTLES 184
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 37.1 bits (82), Expect = 0.003
Identities = 27/95 (28%), Positives = 49/95 (51%)
Frame = +1
Query: 208 SSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQ 387
S L + + RIL++GL +GK++I +K+ N+++ T + + + ++F
Sbjct: 14 SRLFSNKEMRILMLGLDAAGKTTI----LYKLKLNQSVVTIPTVGFNVETVTYKN-IKFN 68
Query: 388 IWDFPGQIDFFDPTFDSDTIFGGCGALVFVIDAQD 492
+WD GQ D P + F G L+FV+D+ D
Sbjct: 69 VWDVGGQ-DKIRPLWRH--YFTGTKGLIFVVDSAD 100
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 29.9 bits (64), Expect = 0.50
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = +1
Query: 211 SLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQI 390
SL + RIL++GL +GK++I +K+ E + T + + + + F +
Sbjct: 11 SLFGKREMRILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYRN-ISFTV 65
Query: 391 WDFPGQIDFFDPTFDSDTIFGGCGALVFVIDAQD 492
WD GQ D P + F ++FV+D+ D
Sbjct: 66 WDVGGQ-DKIRPLWRH--YFQNTQGIIFVVDSND 96
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 29.1 bits (62), Expect = 0.87
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +1
Query: 493 DYQDALDKLQLTVTKAYRVNSNIKFEV-FIHKVDGLNDDYKMESQRDIHHRAT 648
D QDA+ LQ ++ Y+V ++K + F +V+G+ D+Y++ R + H AT
Sbjct: 459 DTQDAIVALQEEASEGYKVGLDLKTGMPFDPEVEGIYDNYRV--IRHMLHSAT 509
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 28.7 bits (61), Expect = 1.1
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +1
Query: 223 DHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFP 402
+ + R+LL+GL +GK++I K + ++ NE + QI ++ ++F IWD
Sbjct: 14 EREVRVLLLGLDNAGKTTILKCLLNE-DVNE-VSPTFGFQIRTLEVEG---LRFTIWDIG 68
Query: 403 GQ---IDFFDPTFDSDTIFGGCGALVFVIDAQDD 495
GQ +F+ F+S A+++V+D+ DD
Sbjct: 69 GQKTLRNFWKNYFESTE------AIIWVVDSLDD 96
>SPCC1442.09 |trp3||anthranilate synthase component
I|Schizosaccharomyces pombe|chr 3|||Manual
Length = 489
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 460 GALVFVIDAQDDYQDALDKLQLTVT 534
G +VF D QD+Y + L+KL+ VT
Sbjct: 448 GGIVFDSDEQDEYVETLNKLRSNVT 472
>SPBC14F5.07 |||ER-localized ubiquitin ligase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1242
Score = 27.9 bits (59), Expect = 2.0
Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 6/108 (5%)
Frame = +1
Query: 175 GPFEQNGDGDSSSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKD 354
G Q +S + DH+P I+ S + V + + N + E+ NQ+V D
Sbjct: 354 GAVTQANGIESDFTRVDHEPIIVNNDDENGNNESENEEVIEEDNLNRNVIAEAQNQVVAD 413
Query: 355 DINNSSFVQFQIW------DFPGQIDFFDPTFDSDTIFGGCGALVFVI 480
+ N+ QI DF G ++F C + FV+
Sbjct: 414 EERNAVARAAQIAEADDADDFDGILEFLGLRGPITGFLQNCLVIAFVV 461
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.1 bits (57), Expect = 3.5
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +1
Query: 268 KSSIQKVVFHKMSPNETLFLESTN-QIVKDDINNSSFVQFQIWDFPGQIDFFDPTFDSDT 444
+ S++ H + + ++ST + D+ +F FQ D PG +DF D
Sbjct: 173 RRSLRYTDTHYLERERVMSIKSTPLTLAVSDMKGKTFA-FQCIDTPGHVDFVDEVAAPMA 231
Query: 445 IFGGCGALVFVID 483
I G +V VI+
Sbjct: 232 ISDGVVLVVDVIE 244
>SPBP8B7.19 |spt16||FACT complex component Spt16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1019
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +1
Query: 100 LFSMIQSYQDDPNCYVGSFPKDFTYGPFEQNGD 198
LF I Y N VG FPKD T G F D
Sbjct: 118 LFEKIIEYIRATNKKVGVFPKDKTQGKFINEWD 150
>SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +1
Query: 205 SSSLQDDHKPRILLMGLRRSGKSSIQKVVFHKM 303
S+S D PR+++ G + SGKSS + + +++
Sbjct: 323 STSKSDYVVPRLMVCGPKGSGKSSFSRYITNRL 355
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 25.8 bits (54), Expect = 8.1
Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +1
Query: 205 SSSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQF 384
SS+ + D K + S+IQ V+FH M E + ++ SF++F
Sbjct: 276 SSAYEKDRKSSEKAASILEKSISAIQTVIFHSMQDTEYRYFADA-----CSTSSKSFLRF 330
Query: 385 QIWD-FPGQIDFF 420
D F G + F
Sbjct: 331 SFLDAFQGGVSQF 343
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/19 (63%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Frame = +1
Query: 118 SYQD-DPNCYVGSFPKDFT 171
+Y D D N +GSFPKDFT
Sbjct: 44 TYVDSDGNRKIGSFPKDFT 62
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,517,363
Number of Sequences: 5004
Number of extensions: 74547
Number of successful extensions: 202
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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