Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_K12
(876 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1609 + 34760576-34760688,34760781-34760948,34761566-347616... 32 0.69
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 31 1.6
08_02_0491 + 17749763-17750143,17750694-17750751,17750846-177508... 30 2.1
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 30 2.1
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 30 2.1
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 30 2.1
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 30 2.1
08_02_1311 - 26039741-26039930,26040185-26040316,26040528-260406... 29 6.5
03_01_0365 - 2839190-2839251,2839637-2839694,2839946-2840032,284... 29 6.5
08_01_0387 - 3426058-3426168,3426279-3426473,3426612-3426724,342... 28 8.5
07_03_1116 - 24084162-24084201,24084481-24084570,24084640-240852... 28 8.5
07_03_0638 + 20196216-20196650,20196810-20196930,20197072-201971... 28 8.5
>04_04_1609 +
34760576-34760688,34760781-34760948,34761566-34761634,
34762125-34762247,34762296-34762501,34762723-34762729,
34762961-34763006,34763092-34763151,34763249-34763317,
34763790-34763873,34764178-34764263,34764859-34764949,
34765029-34765109,34765191-34765265,34765392-34765526
Length = 470
Score = 31.9 bits (69), Expect = 0.69
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 85 CFKLSLFSMIQSYQDDPNCYVGSFPKDFTYGPFEQNGDGDS--SSLQDDHKPRI 240
C L LFS ++ YQ PN VGS K+ YG FE + S LQ + PR+
Sbjct: 336 CEILRLFSRVE-YQL-PNLIVGSITKESLYGAFENGITAEQIISFLQQNAHPRV 387
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 30.7 bits (66), Expect = 1.6
Identities = 26/95 (27%), Positives = 44/95 (46%)
Frame = +1
Query: 208 SSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQ 387
S L + RIL++GL +GK++I +K+ E + T + + + + F
Sbjct: 10 SRLFSKKEMRILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFT 64
Query: 388 IWDFPGQIDFFDPTFDSDTIFGGCGALVFVIDAQD 492
+WD GQ D P + F L+FV+D+ D
Sbjct: 65 VWDVGGQ-DKIRPLWRH--YFQNTQGLIFVVDSND 96
>08_02_0491 +
17749763-17750143,17750694-17750751,17750846-17750891,
17750932-17750998,17751100-17751108
Length = 186
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = -1
Query: 468 KSSTSTKYGVRIKCRIKEVYLPGKVPYLKLYKT---AVINVVFNNLIGRF*KQCLIWRHL 298
K+ TS + G + KE+ +V YL L+ + ++ N + ++ C+I RH+
Sbjct: 95 KNGTSVERGFQFCNSFKEIQRDQRVLYLLLHVSKAGSLFNFIVQQFALKYLSDCIIARHV 154
Query: 297 VKYNFLN 277
K N N
Sbjct: 155 CKVNIEN 161
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +1
Query: 235 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 414
RIL++GL +GK++I +K+ E + T + + + + F +WD GQ D
Sbjct: 142 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 195
Query: 415 FFDPTFDSDTIFGGCGALVFVIDAQD 492
P + F L+FV+D+ D
Sbjct: 196 KIRPLWRH--YFQNTQGLIFVVDSND 219
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +1
Query: 235 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 414
RIL++GL +GK++I +K+ E + T + + + + F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 415 FFDPTFDSDTIFGGCGALVFVIDAQD 492
P + F L+FV+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +1
Query: 235 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 414
RIL++GL +GK++I +K+ E + T + + + + F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 415 FFDPTFDSDTIFGGCGALVFVIDAQD 492
P + F L+FV+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 30.3 bits (65), Expect = 2.1
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +1
Query: 235 RILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQID 414
RIL++GL +GK++I +K+ E + T + + + + F +WD GQ D
Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEYKN-ISFTVWDVGGQ-D 72
Query: 415 FFDPTFDSDTIFGGCGALVFVIDAQD 492
P + F L+FV+D+ D
Sbjct: 73 KIRPLWRH--YFQNTQGLIFVVDSND 96
>08_02_1311 -
26039741-26039930,26040185-26040316,26040528-26040676,
26040807-26040893,26041338-26041420,26042008-26042137
Length = 256
Score = 28.7 bits (61), Expect = 6.5
Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Frame = +1
Query: 208 SSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNET-----LFLESTNQ--IVKDDINN 366
S L+ I+L GL SGK+ ++F+++ T +E N ++ ++
Sbjct: 45 SCLKSSKANTIVLSGLSGSGKT----ILFYQLRDGSTHQGTVTSMEQNNDTFVLHSELER 100
Query: 367 SSFVQ-FQIWDFPGQIDFFDPTFDSDTIFGGCGALVFVIDAQD---DYQDALDKLQLTVT 534
V+ + D PG P D + +V+V+DAQD A + L +T
Sbjct: 101 RGKVKPVHVVDVPGHARL-KPKLDE--VLPQAAGIVYVVDAQDFLSTMHAAAEYLYDILT 157
Query: 535 KAYRVNSNIKFEVFIHKVD 591
KA V + +F +K D
Sbjct: 158 KATVVKKRVPVLIFCNKTD 176
>03_01_0365 -
2839190-2839251,2839637-2839694,2839946-2840032,
2840117-2840206,2840575-2840650,2840877-2840971,
2841090-2841173,2841270-2841343,2841803-2841827
Length = 216
Score = 28.7 bits (61), Expect = 6.5
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +1
Query: 175 GPFEQNGDGDSSSLQDDHKPRILLMGLRRSGKSSIQ-KVVFHKMSPNETLFLESTNQIVK 351
G + +S++ D + +++L+G GKS I + V + P + + ++
Sbjct: 13 GGLNNISNDNSATDSKDLRAKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQT 72
Query: 352 DDINNSSFVQFQIWDFPGQ 408
+ +S+ V+F+IWD GQ
Sbjct: 73 LALEDSTIVKFEIWDTAGQ 91
>08_01_0387 -
3426058-3426168,3426279-3426473,3426612-3426724,
3427121-3427157,3427270-3427341,3427849-3427962,
3428129-3428200,3428343-3428381,3429340-3429414,
3429561-3429674,3429749-3429813,3429927-3430047,
3430942-3431063,3431547-3431634
Length = 445
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +1
Query: 205 SSSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQF 384
S + D H P + L+G GKSS+ +++ P + +T I+ I S+ +F
Sbjct: 236 SMPVVDPHIPTLCLVGSPNVGKSSLVRIL-SSGKPEVCSYPFTTRGILMGHI-VSNHERF 293
Query: 385 QIWDFPG 405
Q+ D PG
Sbjct: 294 QVTDTPG 300
>07_03_1116 -
24084162-24084201,24084481-24084570,24084640-24085220,
24085653-24085822,24086006-24087074
Length = 649
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 190 NGDGDSSSLQDDHKPRILL 246
NGDG+++SL+DD K R LL
Sbjct: 404 NGDGNAASLKDDPKTRELL 422
>07_03_0638 +
20196216-20196650,20196810-20196930,20197072-20197168,
20197284-20197323,20197648-20197731,20198966-20199130
Length = 313
Score = 28.3 bits (60), Expect = 8.5
Identities = 18/76 (23%), Positives = 31/76 (40%)
Frame = +1
Query: 196 DGDSSSLQDDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSF 375
D D++ ++D ++ L+G + GK+S L + N + K +
Sbjct: 117 DRDAADVEDVVSLKVSLLGDCQIGKTSFMVKYVGDDEEQNGLQMTGLNLMDKTLAVRGAR 176
Query: 376 VQFQIWDFPGQIDFFD 423
+ F IWD G F D
Sbjct: 177 IAFSIWDVAGDSQFLD 192
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,357,711
Number of Sequences: 37544
Number of extensions: 430025
Number of successful extensions: 1035
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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