Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_K12
         (876 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    27   0.99 
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    27   0.99 
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            26   1.7  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 25  IGNSLRFDTRTCHSCSCCRFCFKLS 99
           I +S+ F   T  SCSC   CF++S
Sbjct: 407 IRSSIAFTANTSISCSCLPGCFEIS 431


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 26.6 bits (56), Expect = 0.99
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 25  IGNSLRFDTRTCHSCSCCRFCFKLS 99
           I +S+ F   T  SCSC   CF++S
Sbjct: 407 IRSSIAFTANTSISCSCLPGCFEIS 431


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 8/138 (5%)
 Frame = +1

Query: 235 RILLMGLRRSGKSSIQ----KVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFP 402
           +++L+G    GKSS+     K  FH+   +       T  +  DD      V+F+IWD  
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTT----VKFEIWDTA 81

Query: 403 GQIDFFDPTFDSDTIFGGCGALVFVIDAQDDYQDALDKLQLTVTKAYR-VNSNIKFEVFI 579
           GQ  +      +   + G  A + V D Q+   D+  + +  V +  R  + NI   +  
Sbjct: 82  GQERYHSL---APMYYRGAQAAIVVYDIQN--SDSFARAKTWVKELQRQASPNIVIALAG 136

Query: 580 HKVDGLND---DYKMESQ 624
           +K D  N    DY+   Q
Sbjct: 137 NKADLANSRVVDYEEAKQ 154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 874,329
Number of Sequences: 2352
Number of extensions: 18063
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)