Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_K12
         (876 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   4.9  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    22   6.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   6.5  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   6.5  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   6.5  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   8.5  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = +2

Query: 131 IQIVMWGRSPRILPMDLSSKM 193
           I+ ++W R  R+LP++   K+
Sbjct: 519 IESIVWERDTRVLPINRKQKV 539


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 711 IYACKMEG*MYMMETSFCKI 652
           I AC+ME  +Y M+   C I
Sbjct: 113 IIACQMEFQLYPMDIQICPI 132


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 163 PWGTTPHNNLDRPDNSE 113
           PW T P  +L + DN +
Sbjct: 92  PWSTLPIEDLTKSDNED 108


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 163 PWGTTPHNNLDRPDNSE 113
           PW T P  +L + DN +
Sbjct: 130 PWSTLPIEDLTKSDNED 146


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 704 AYMTIQYLKAFSKVVQKLIPQLPTLENLXIY*YLTPE 814
           A+  + Y+K F  +   +   +PT EN   Y Y  P+
Sbjct: 252 AWTKVIYVKRFFGLPVGVTAAIPTSENPADYRYFCPD 288


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 704 AYMTIQYLKAFSKVVQKLIPQLPTLENLXIY*YLTPE 814
           A+  + Y+K F  +   +   +PT EN   Y Y  P+
Sbjct: 252 AWTKVIYVKRFFGLPVGVTAAIPTSENPADYRYFCPD 288


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 704 AYMTIQYLKAFSKVVQKLIPQLPTLENLXIY*YLTPE 814
           A+  + Y+K F  +   +   +PT EN   Y Y  P+
Sbjct: 252 AWTKVIYVKRFFGLPVGVTAAIPTSENPADYRYFCPD 288


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 683 IYPSILQAYMTIQYLKAFSKVVQKLI 760
           + PS LQ+Y T     AF  + QK++
Sbjct: 403 LIPSALQSYSTSMRDPAFYMLYQKIL 428


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,868
Number of Sequences: 438
Number of extensions: 5159
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)