Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_K06
         (894 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.6  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/50 (34%), Positives = 17/50 (34%)
 Frame = +3

Query: 744 PPEXPVTKRPXXXPXPXKXPXXWXFPIGXRPPXXXSTKXHPPXPKGGXXP 893
           PP  P    P   P P   P     P G  PP        PP PKG   P
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPP-PKGPPPPPPAKGPPPPPPPKGPSPP 365



 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/53 (35%), Positives = 20/53 (37%)
 Frame = +3

Query: 726 PXXQGIPPEXPVTKRPXXXPXPXKXPXXWXFPIGXRPPXXXSTKXHPPXPKGG 884
           P  +G PP  P    P   P P K P     P    PP        PP PKGG
Sbjct: 339 PPPKGPPPPPPAKGPPP--PPPPKGPS----PPPPPPPGGKKGGPPPPPPKGG 385


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,543,178
Number of Sequences: 37544
Number of extensions: 199378
Number of successful extensions: 414
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 403
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)