Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_K03
         (898 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    69   4e-14
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   6.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   6.6  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 69.3 bits (162), Expect = 4e-14
 Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 6/172 (3%)
 Frame = +1

Query: 199 CILDSSKLALPYFVKGIPEIGVSPVDPFTIDEVNADNGE----LKLLFKDIKVEGISK-C 363
           CI ++ + A+     G+    + P++P  +D V     +    L+  +K+IK+ G++K  
Sbjct: 43  CIAEAVRDAVVSLAGGLKSFKILPIEPLAVDSVKIGESQGSVTLRQEYKNIKLYGLTKNL 102

Query: 364 EIGEIERPTDKTHLRFVLYCP-ILITGKYKSGGKILLVDVEGEGDTEIKTDKARIEVDIK 540
           EI       DK  L    Y P +     YK  GK+LL+ V G G + I     +   DI 
Sbjct: 103 EIKNYNIDWDKCILSSESYNPQVDFVADYKIEGKVLLLPVRGAGKSNITMYDLKSHNDIY 162

Query: 541 MKTIVKDGKSYYKFTGFDYKYEPIEKLHFKFDNMFNGDKAKAEPFLKLLDQS 696
            +   K+G++Y +      K+ P  K+  +F+N+F+G+K   E   + ++++
Sbjct: 163 CEKYEKNGETYLRIKKHAVKFNP-AKVKLRFENLFDGNKELGEQMNRFINEN 213


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 538 KMKTIVKDGKSYYKFTGFDYKYEPIEKLHF 627
           ++KT +   K YYK +G   +YE  E + +
Sbjct: 24  RVKTPLGAIKGYYKISGNGKQYEAYEGIPY 53


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 538 KMKTIVKDGKSYYKFTGFDYKYEPIEKLHF 627
           ++KT +   K YYK +G   +YE  E + +
Sbjct: 24  RVKTPLGAIKGYYKISGNGKQYEAYEGIPY 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,247
Number of Sequences: 438
Number of extensions: 4424
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)