Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_J11
(894 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_1082 - 11073874-11073988,11074072-11074133,11074217-110745... 33 0.23
02_01_0015 - 98311-98412,98635-98707,98830-98921,99139-99230,993... 33 0.31
03_02_0992 + 13049871-13050449 31 1.2
05_07_0200 - 28368890-28369021,28369169-28369303,28369918-283699... 31 1.6
05_04_0077 - 17712043-17712246,17712487-17712522,17712746-177129... 30 2.9
11_06_0142 - 20564572-20565951 29 3.8
07_03_1107 - 24024387-24024497,24025799-24026410 29 3.8
03_05_0447 - 24421442-24422767 29 3.8
08_01_0627 + 5451140-5451839,5452635-5452662,5452730-5452786,545... 29 5.0
06_02_0023 + 10702040-10702364,10702530-10702747,10703643-107041... 29 5.0
05_07_0219 - 28474661-28475146,28475979-28476644 28 8.7
04_04_0437 + 25193263-25194627 28 8.7
04_03_0999 - 21600231-21600788,21600896-21601056,21601149-216012... 28 8.7
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111... 28 8.7
>08_01_1082 -
11073874-11073988,11074072-11074133,11074217-11074505,
11074652-11074743,11074840-11074966,11075075-11075156,
11075611-11075887,11075993-11076158,11076874-11077202
Length = 512
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +1
Query: 427 TLG-NLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQXQGDGGQGLRHPXPASRASSRGT 603
T+G N D + +F +S ++ S++ NP LT + + Q L+ P P + SS T
Sbjct: 418 TIGMNTDSSSKFPISYVLKMSFSIDDTMPNPLLTSEKLSKNKDQ-LQFPPPMTYTSSPST 476
Query: 604 FYPLTGMSKET 636
TG+SK++
Sbjct: 477 TIDNTGLSKDS 487
>02_01_0015 -
98311-98412,98635-98707,98830-98921,99139-99230,
99363-99432,99683-99781,100008-100093,100541-100655,
100853-100918,101064-101143,101226-101301,101915-102151,
102559-102590,102993-103047,103384-103498,104497-104579,
105182-105232,105740-105802,105945-106010,106144-106279,
106503-106591,106844-106964,107138-107340,107434-107820
Length = 862
Score = 33.1 bits (72), Expect = 0.31
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +1
Query: 244 STLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 384
S LLD + E D +++PD+ + VF+++ +P+++D G K
Sbjct: 103 SKLLDPKRGRTEVFDGFSSVFSPDSSQHDVFSQVMNPLVDDLLLGGK 149
>03_02_0992 + 13049871-13050449
Length = 192
Score = 31.1 bits (67), Expect = 1.2
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Frame = +3
Query: 495 RGVPLQPLPHRVPXTRR-WRTRS-----PAPXSSLEGEL--KGHVLPPHRHVEGDP 638
R PL L HR P + R ++ RS P+P +L G +G VLPPHRH P
Sbjct: 33 RRPPLCRLCHRSPSSGRIYKGRSLPPPPPSPLLALAGSRIGRGGVLPPHRHRRSVP 88
>05_07_0200 -
28368890-28369021,28369169-28369303,28369918-28369947,
28370019-28370093,28370222-28370333,28370440-28370621,
28370723-28370854,28372193-28373479
Length = 694
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 155 PGXPTLSRC*RSTLPG-KYSTA*RTKRPHSDPPSLTASNRVSRTWTPASVSTRRTPSRTP 331
P P + R RS P S++ P PP A+ R SRT TPA+ S+ P+ P
Sbjct: 314 PPPPPMPRS-RSASPSPSTSSSGSAGPPAPPPPPPPAAKRTSRTSTPATTSS-SAPASGP 371
Query: 332 C 334
C
Sbjct: 372 C 372
>05_04_0077 - 17712043-17712246,17712487-17712522,17712746-17712900,
17713431-17713591,17713950-17714110,17714188-17715657,
17715704-17715998,17716461-17717737,17717826-17718137,
17718223-17718356,17718449-17718521,17719994-17720059,
17720748-17720936
Length = 1510
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 567 PXSSLEGELKGHVLPPHRHVEGDPAAAHRRPLPVQGGRPLP 689
P S +E ++ HVLP H GD RRP P Q G+ LP
Sbjct: 1136 PNSLVEQKVNSHVLPIHG--SGD----FRRPTPDQNGKTLP 1170
>11_06_0142 - 20564572-20565951
Length = 459
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 248 PSLTASNRVSRTWTPASVSTRRTPSRTPCSPSCL 349
P L S V R+W A + RR R+P P CL
Sbjct: 31 PDLVHSGAVCRSWHSAFATFRRLGLRSPPHPPCL 64
>07_03_1107 - 24024387-24024497,24025799-24026410
Length = 240
Score = 29.5 bits (63), Expect = 3.8
Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Frame = +3
Query: 486 PLARGVPLQPLPHRVPXTRRWRTRSPAPXSSLEGELKGHVLPPHRHVEGDPAAAHRRP-- 659
P P P P + P T+ + +PAP ++ P V P+ A P
Sbjct: 72 PAPAEAPTTPAPTKAPPTKSTKAPAPAPKAAKATPPPASSPPVEAPVASPPSPAAEAPAT 131
Query: 660 LPVQGGRPLPA 692
+P + P PA
Sbjct: 132 IPTKPDAPAPA 142
>03_05_0447 - 24421442-24422767
Length = 441
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 69 LDGCSSARKAATMVDAATLEKLEAGFSKLQG 161
+DGC S+ ++ AA L +LEAG K G
Sbjct: 62 IDGCGSSGAGDALLAAAALARLEAGLRKRTG 92
>08_01_0627 +
5451140-5451839,5452635-5452662,5452730-5452786,
5453205-5453874
Length = 484
Score = 29.1 bits (62), Expect = 5.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = -2
Query: 185 FSSDLESDXLELAETSLQFLEGCGVDHCCGFSGT*TTVKNRLLGARIKILRIPY 24
F+++L ++ L + FLE + HC S T++ + ARIK LR+PY
Sbjct: 358 FANNLSNEGLTAILDNCPFLESLDIRHCFNVSMD-DTLQAKC--ARIKTLRLPY 408
>06_02_0023 +
10702040-10702364,10702530-10702747,10703643-10704190,
10704272-10704523,10704611-10704721,10704812-10704893,
10704969-10705061,10705146-10705340
Length = 607
Score = 29.1 bits (62), Expect = 5.0
Identities = 22/43 (51%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 492 ARGVPL--QPLPHRVPXTRRWRTRSPAPXSSLEGELKGHVLPP 614
A G PL QPL R TR W SPAP S L L HV PP
Sbjct: 164 AEGKPLIVQPLNKR---TRNWP--SPAPQSYLAPPLDEHVPPP 201
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 233 PHSDPPSLTASNRVSRTWTPASVSTRRTPSRTPCSPSCL 349
PH PPS S+ + T T + T TP+ P S + L
Sbjct: 86 PHPPPPSPATSSSRTATATATATPTSPTPTPPPTSATLL 124
>04_04_0437 + 25193263-25194627
Length = 454
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +1
Query: 223 NKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELF 348
N TS GS D I+ G N+D YAP+ S+ A F
Sbjct: 365 NYFTSLGSCCWDLIKEGKLNVDRNCIPYAPNQRSHDECAAFF 406
>04_03_0999 -
21600231-21600788,21600896-21601056,21601149-21601241,
21601379-21601531,21601917-21601992,21602078-21602197,
21602348-21602597,21602917-21603008,21603408-21603581
Length = 558
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -2
Query: 491 ERPQRTRVETTNSPAGSRLPSVSTSPQFLGGCLSVF 384
+RP+ +RV T +R+P + +++ G LS F
Sbjct: 36 KRPRSSRVAQTRPQPEARIPGTQSDSEYMSGQLSAF 71
>03_01_0141 +
1116833-1117082,1117658-1118574,1119417-1119579,
1119668-1120497,1120562-1120570
Length = 722
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 486 PLARGVPLQPLPHRVPXTRRWRTRSP-APXSSLEG 587
PLARG P P PHR RR R+P P S G
Sbjct: 51 PLARG-PTSPPPHRTTRLRRNLRRAPCTPLSRRRG 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,650,636
Number of Sequences: 37544
Number of extensions: 479953
Number of successful extensions: 1803
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1800
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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