Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_J11
         (894 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.   401   e-114
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.   317   8e-89
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    26   0.53 
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   2.8  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   2.8  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   5.0  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    23   5.0  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   6.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   8.7  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score =  401 bits (987), Expect = e-114
 Identities = 182/233 (78%), Positives = 205/233 (87%)
 Frame = +1

Query: 196 TREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHN 375
           +++VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH 
Sbjct: 31  SKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHG 90

Query: 376 GFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQXQGDGGQ 555
           GFKKTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFNPCLTE+Q + +  +
Sbjct: 91  GFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYK-EMEE 149

Query: 556 GLRHPXPASRASSRGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWXTGRGI 735
            +           +GTFYPLTGMSKETQQ+LIDDHFLFKEGDRFLQAANACRFW TGRGI
Sbjct: 150 KVSSTLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANACRFWPTGRGI 209

Query: 736 YHNENKTFLVWCNEEDHLRIISMQMGGDLQQVYXRLVSAVNEIEKXIPFXHHD 894
           YHN++KTFLVWCNEEDHLRIISMQMGGDL QVY RLV AVNEIEK + F H+D
Sbjct: 210 YHNDDKTFLVWCNEEDHLRIISMQMGGDLGQVYRRLVHAVNEIEKRLLFSHND 262



 Score = 29.5 bits (63), Expect = 0.043
 Identities = 13/17 (76%), Positives = 14/17 (82%)
 Frame = +3

Query: 105 MVDAATLEKLEAGFSKL 155
           MVD A L+KLE GFSKL
Sbjct: 1   MVDQAVLDKLETGFSKL 17


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score =  317 bits (779), Expect = 8e-89
 Identities = 143/187 (76%), Positives = 164/187 (87%)
 Frame = +1

Query: 196 TREVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHN 375
           +++VFD LK KKTSF STLLDCIQSG+ENLDSGVGIYAPDAE+Y++FA+LFDPIIEDYH 
Sbjct: 15  SKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPDAEAYTLFADLFDPIIEDYHG 74

Query: 376 GFKKTDKHPPKNWGDVDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPCLTESQXQGDGGQ 555
           GFKKTDKHPPK++GDVD+LGNLDPA EF+VSTRVRCGRSLEGYPFNPCLTE+Q + +  +
Sbjct: 75  GFKKTDKHPPKDFGDVDSLGNLDPANEFIVSTRVRCGRSLEGYPFNPCLTEAQYK-EMEE 133

Query: 556 GLRHPXPASRASSRGTFYPLTGMSKETQQQLIDDHFLFKEGDRFLQAANACRFWXTGRGI 735
            +           +GTFYPLTGMSKETQQ+LIDDHFLFKEGDRFLQAANA RFW TGRGI
Sbjct: 134 KVSSTLSGLEGELKGTFYPLTGMSKETQQKLIDDHFLFKEGDRFLQAANAXRFWPTGRGI 193

Query: 736 YHNENKT 756
           YHN++KT
Sbjct: 194 YHNDDKT 200


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
 Frame = -1

Query: 468 GDHELAGGVEVAER---VHVSPVLGRVLVGLLEAIVVVLDDRVKQLGEHGVRLGVRRV-D 301
           GD  L G + V ER   +   PV+ +  V  LEA++  LD    Q    GVR+G   + D
Sbjct: 115 GDLVLGGLMMVHERQDRLTCGPVMPQGGVQALEAMLYTLDKLNTQDIVPGVRIGAHILDD 174

Query: 300 TDAGVQVLDTRLDAVK 253
            D     L+  +D +K
Sbjct: 175 CDNDTYGLEMSVDFIK 190


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 230 FLFFRLSNTSLVRYFFSSDLESDXLE 153
           F+F  L   +LV Y   SD+ SD +E
Sbjct: 314 FVFGALLEFALVNYASRSDMHSDNIE 339


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 230 FLFFRLSNTSLVRYFFSSDLESDXLE 153
           F+F  L   +LV Y   SD+ SD +E
Sbjct: 314 FVFGALLEFALVNYASRSDMHSDNIE 339


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 201 GSIRQPEEQKDLIRIHPP 254
           GS  QP+EQ+ L  + PP
Sbjct: 33  GSAEQPKEQEPLPPVTPP 50


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 712 FWXTGRGIYHNENKTFLVWCNEEDHLRIISMQM 810
           F+  GRGI + + K   V  +++ H++I    M
Sbjct: 99  FFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGM 131


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 269 RVSRTWTPASVSTRRTPSRTP 331
           +V   W P  +  RRTP  TP
Sbjct: 352 QVFLNWMPRLLMMRRTPYSTP 372


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 82  QVPEKPQQWSTPQPSR 129
           Q P+ PQ+ S P PS+
Sbjct: 29  QSPQAPQRGSPPNPSQ 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,306
Number of Sequences: 438
Number of extensions: 4345
Number of successful extensions: 26
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)