Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_J10
(851 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 29 0.63
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 28 1.5
SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces... 28 1.5
SPBC1198.03c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 1.5
SPBC25B2.07c |mug164||microtubule-associated protein|Schizosacch... 27 2.6
SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme ... 27 4.5
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c... 26 5.9
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 26 5.9
SPBP19A11.01 |||glycine decarboxylase complex subunit H|Schizosa... 26 5.9
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 26 5.9
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 29.5 bits (63), Expect = 0.63
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 581 FYSWCYFRALCVYWITGFIYETFN 510
++SWCY+ A V W GF + N
Sbjct: 800 YHSWCYYVAALVLWSIGFALDEEN 823
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 586 VNSIPGVISEPSVFTGLPASSTKPSTVHSPLSCLYPKPSFMTKVQK*ILSPIFSAAFRS- 410
V+ P S P + +P ST P+ V S P P+ +TK + + PI +++ RS
Sbjct: 111 VSHSPHSFSNPR-YVAVPQKSTSPNQV---CSYCEPLPNHLTKTKSCSIPPILNSSDRSP 166
Query: 409 LNIHLPF 389
L++ P+
Sbjct: 167 LSLPTPY 173
>SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 419
Score = 28.3 bits (60), Expect = 1.5
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +3
Query: 195 VWVLLFKIVLCYEAPPATLEAIHPKGLRVSVPDEGFSLFAFHGKLNEEMEGLEA--GHWS 368
+W+L+F + L L + G R +V D S A L +E +G G
Sbjct: 89 IWILIFIVALICSVLIGVLGGV--LGHRTAVRDRHPSYKAKTYSLVKEYKGTTFFDGFDF 146
Query: 369 RDITKPKNGRWIFRDRNAALKIG 437
+IT P +G + DRN++ K+G
Sbjct: 147 MNITDPTHGFVQYLDRNSSAKLG 169
>SPBC1198.03c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 249
Score = 28.3 bits (60), Expect = 1.5
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 111 VNILHAVFNQTYRTK*NTTSVTRMYKTCV 197
V++ H V N+T++TK NT + + + V
Sbjct: 47 VHVFHGVVNRTFKTKGNTVGLPKSFSKAV 75
>SPBC25B2.07c |mug164||microtubule-associated
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 588 STSLNPESPQSIPNQPPDNLXAKPPS 665
S+S+N P SI +PP NL PS
Sbjct: 393 SSSINRRPPSSINQRPPSNLRILAPS 418
>SPBC1604.21c |ptr3|uba1, SPBC211.09|ubiquitin activating enzyme
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1012
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 113 KHFTCCVQSNLPNQIEHNI 169
K F C N PN+IEH I
Sbjct: 588 KSFPICTLKNFPNRIEHTI 606
>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 554
Score = 26.2 bits (55), Expect = 5.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 683 LTGIAFRWWFSGQVVWRLIGYGL 615
LT ++F WW GQV+ L+ +GL
Sbjct: 208 LTVMSF-WWAIGQVIANLVSWGL 229
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 26.2 bits (55), Expect = 5.9
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 168 SVTRMYKTCVWVLLFKIVLCYEAPPATLEAIHPKGLRVSVPDEGFSLF 311
S+TR C+ +L K V+ + P + HP +V V D G S F
Sbjct: 804 SITRQLIQCLTLLNEKHVIHCDLKPENILLCHPFKSQVKVIDFGSSCF 851
>SPBP19A11.01 |||glycine decarboxylase complex subunit
H|Schizosaccharomyces pombe|chr 2|||Manual
Length = 169
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 558 SEITPGIEFTSTSLNPESPQSIPNQPPDNLXAKPPSEGYPCELSLST 698
S++ + T TS+N S PD + + P EG+ C++ LS+
Sbjct: 104 SDVYSPVSGTVTSINESLGDS-----PDKVSSSPEEEGWICKIKLSS 145
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 26.2 bits (55), Expect = 5.9
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +3
Query: 582 FTSTSLNPESPQSIPNQPPDNLXAKPPSEGYPCELSLSTVSVPGFVCKGQLLFEDQFNIP 761
+ S S N SP S+P + PP P E+S + +S + L D FNI
Sbjct: 171 YKSYSYN-HSPSSLPTVLNSQALSSPPVPTTPDEVSTNRLSSSTSSMNCRNLVPDNFNIS 229
Query: 762 I 764
I
Sbjct: 230 I 230
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,630,502
Number of Sequences: 5004
Number of extensions: 83484
Number of successful extensions: 238
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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