Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_J10
         (851 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97009-1|AAC69030.2|  339|Caenorhabditis elegans Serpentine rece...    36   0.037
AL117200-6|CAB55058.1|  209|Caenorhabditis elegans Hypothetical ...    29   4.2  
U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical p...    29   5.5  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    28   7.3  
AF067624-5|AAC17564.4|  506|Caenorhabditis elegans Hypothetical ...    28   7.3  
AC024776-3|AAK68466.1|  453|Caenorhabditis elegans Hypothetical ...    28   9.7  

>U97009-1|AAC69030.2|  339|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 32 protein.
          Length = 339

 Score = 35.9 bits (79), Expect = 0.037
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -3

Query: 609 TLGSDWCW*ILFLVLFQSPLCLLDYRLHLRNLQLSTPRYPVCIL 478
           TLG  +   +LFL+ F+SP CL  Y + L N  ++   Y +C L
Sbjct: 19  TLGIIFNGFLLFLIFFKSPSCLTPYTVFLANTSITQLGYCICFL 62


>AL117200-6|CAB55058.1|  209|Caenorhabditis elegans Hypothetical
           protein Y50E8A.10 protein.
          Length = 209

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
 Frame = +3

Query: 525 DEAGNPVNTEGSEITPGIEFTSTSLNPESPQSIPNQP-----PDNLXAKPPSEGYPCELS 689
           DE  N     G+  T G   T+ S   ++ +S+PN P     P +L A  P+  Y    +
Sbjct: 119 DEGENSTQRSGAAETNGPPVTAKSALSKTAKSVPNAPNTSVKPTSLAANSPAPSYTNPGT 178

Query: 690 LSTVSVP 710
            +  SVP
Sbjct: 179 PAANSVP 185


>U41016-10|AAA82321.2| 1656|Caenorhabditis elegans Hypothetical
           protein R11G1.1 protein.
          Length = 1656

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 592 PV*TQSPLSPYPISLQTTXPLNHHLKAIP 678
           P+   SPL+ +PI + TT P  HH   +P
Sbjct: 315 PITAPSPLNNWPIPIVTTTPDPHHQGPLP 343


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +3

Query: 531 AGNPVNTEGSEITPGIEF--TSTSLNPESPQSIPNQPPDNLXAKPPSEGYPCELSLSTVS 704
           +G+      S ITP  +   TSTS  P    S P  P   + A P + G     S ST++
Sbjct: 472 SGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTASPSTIT 531


>AF067624-5|AAC17564.4|  506|Caenorhabditis elegans Hypothetical
           protein M01B12.5a protein.
          Length = 506

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 747 QFNIPIHRGKIWVPXVKXLXEPDFP 821
           +FN+ +H GK+W+  V    E D P
Sbjct: 288 EFNMLVHDGKLWIIDVSQSVEQDHP 312


>AC024776-3|AAK68466.1|  453|Caenorhabditis elegans Hypothetical
           protein Y41D4B.16 protein.
          Length = 453

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 4/73 (5%)
 Frame = +3

Query: 498 GEWTVEGFVDEAGNPVNTEGS----EITPGIEFTSTSLNPESPQSIPNQPPDNLXAKPPS 665
           G + V+ F  + G P  T  +      TP I  T+TS     P +      ++    PP+
Sbjct: 351 GLYYVQYFNMDTGAPTTTSAALSSTASTPSIASTATSAATNPPTTTAGASTNSPATNPPT 410

Query: 666 EGYPCELSLSTVS 704
              P   S ST S
Sbjct: 411 TSRPITASQSTTS 423


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,043,829
Number of Sequences: 27780
Number of extensions: 470334
Number of successful extensions: 1470
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)