Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_J07
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0701 - 13067547-13067580,13067725-13067864,13068525-130686...    30   2.8  

>02_02_0701 -
           13067547-13067580,13067725-13067864,13068525-13068659,
           13068761-13068808,13068834-13068859,13068990-13069057,
           13069101-13069112,13070359-13070415,13070817-13070935,
           13071700-13071810,13076755-13077066
          Length = 353

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +1

Query: 28  REFLKIFDILDSAHQVISTAPLVS*RPRLNLDKLTMNFAKILSFVFALVLALSMTSAAPE 207
           + F+ IFD +DS+  +I+  PL   + R    K  +    ++  V  + +AL+     P 
Sbjct: 196 KHFVCIFDRMDSSLMLITCQPLRPQQARGEEGKQVLQVLGVMEAVTIMAIALANGGGKP- 254

Query: 208 PRWKIF 225
           P W+ F
Sbjct: 255 PNWQDF 260


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,542,762
Number of Sequences: 37544
Number of extensions: 219599
Number of successful extensions: 498
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)