Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_J05
(907 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 38 0.007
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 38 0.007
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 34 0.12
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.37
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 32 0.65
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.5
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 1.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 2.0
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 2.0
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 3.5
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.6
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 29 6.0
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 28 8.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/40 (47%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 633 PPXGGXXLPPPPXXGPVXFXXGGGGG-XPXXPPXXXGGGG 517
PP GG PPPP P GGGGG P P G GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/40 (47%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -2
Query: 633 PPXGGXXLPPPPXXGPVXFXXGGGGG-XPXXPPXXXGGGG 517
PP GG PPPP P GGGGG P P G GG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGG 821
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 633 PPXGGXXLPPPPXXGPVXFXXGGGGG 556
PP GG PPPP P GGGGG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGG 807
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 633 PPXGGXXLPPPPXXGPVXFXXGGGGG 556
PP GG PPPP P GGGGG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -1
Query: 349 GXXPPXPXFFFFXGPXPPPXWGXXXPPPXPF 257
G PP P F P PPP G PPP F
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = -1
Query: 355 FXGXXPPXPXFFFFXGPXPPPXWGXXXPPPXP 260
F G PP P P PPP +G PPP P
Sbjct: 90 FAGGIPPPPPMMGGI-PPPPPMFGAPPPPPPP 120
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/67 (29%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Frame = -2
Query: 732 PPXGAFXGGXXFXAXVXKFFFXVSPXFXXXXXXPPXGGXXLPPPP--XXGPVXFXXGGGG 559
PP G G + K F + P PP G +PPPP G + G
Sbjct: 47 PPSGILPPGQS----IPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMG 102
Query: 558 GXPXXPP 538
G P PP
Sbjct: 103 GIPPPPP 109
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = -1
Query: 349 GXXPPXPXFFFFXGPXPPP-XWGXXXPPPXPFLPL 248
G PP P F P PPP G PP P P+
Sbjct: 102 GGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKTPV 136
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 31.9 bits (69), Expect = 0.65
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2
Query: 570 GGGGGXPXXPPXXXGGGG 517
GGGGG P PP GGGG
Sbjct: 266 GGGGGYPQPPPQQGGGGG 283
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -2
Query: 630 PXGGXXLPPPPXXGPVXFXXGGGGGXPXXPPXXXGGGG 517
P PPPP P+ G G P PP G G
Sbjct: 624 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -2
Query: 630 PXGGXXLPPPPXXGPVXFXXGGGGGXPXXPPXXXGGGG 517
P PPPP P+ G G P PP G G
Sbjct: 450 PISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 487
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -2
Query: 633 PPXGGXX-LPPPPXXGPVXFXXGGGGGXPXXPPXXXGGGGXFFXXKN 496
PP GG +PPPP GG GG P GGGG F +N
Sbjct: 773 PPRGGMHHMPPPPSFRG---GRGGHGGPPPPHFDRRGGGGPPFRPEN 816
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -2
Query: 624 GGXXLPPPPXXGPVXFXXGGGGGXPXXPPXXXGGGG 517
GG PPPP GGGGG GGGG
Sbjct: 49 GGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGG 84
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 30.3 bits (65), Expect = 2.0
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = -2
Query: 609 PPPPXXGPVXFXXGGGGGXPXXPP---XXXGGGG 517
PPPP P GGG P PP GGGG
Sbjct: 31 PPPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGG 64
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 633 PPXGGXXLPPPPXXGPVXFXXGGGGGXPXXPPXXXGGG 520
PP G PPPP G G G PP G G
Sbjct: 35 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 72
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 633 PPXGGXXLPPPPXXGPVXFXXGGGGGXPXXPPXXXGGG 520
PP G PPPP G G G PP G G
Sbjct: 98 PPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 135
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 633 PPXGGXXLPPPPXXGPVXFXXGGGGGXPXXPPXXXGGG 520
PP G PPPP G G G PP G G
Sbjct: 129 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 166
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 633 PPXGGXXLPPPPXXGPVXFXXGGGGGXPXXPPXXXGGG 520
PP G PPPP G G G PP G G
Sbjct: 253 PPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 290
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 261 GXGGGXXXPQXGGGXGPXKKKKXGXGGXXP 350
G GGG P GGG P G GG P
Sbjct: 28 GNGGGRPRPGNGGGRPPGNGNGNGNGGGRP 57
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2
Query: 630 PXGGXXLPPPPXXGPVXFXXGGGGGXPXXPP 538
P G +PPPP P F G GG P PP
Sbjct: 310 PPGMPGMPPPPP--PSRFGPPGMGGMPPPPP 338
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -2
Query: 624 GGXXLPPPPXXGPVXFXXGG--GGGXPXXPPXXXGGG 520
GG PP P G GG GGG PP GGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -2
Query: 624 GGXXLPPPPXXGPVXFXXGG--GGGXPXXPPXXXGGG 520
GG PP P G GG GGG PP GGG
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -2
Query: 630 PXGGXXLPPPPXXGPVXFXXGGGGGXPXXPP 538
P G +PPPP P F G GG P PP
Sbjct: 320 PPGMPGMPPPPP--PSRFGPPGMGGMPPPPP 348
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 340 PPXPXFFFFXGPXPPPXWGXXXPPP 266
PP P F P PPP +G PPP
Sbjct: 49 PPAP---IFVAPPPPPCFGPACPPP 70
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = -2
Query: 624 GGXXLPPPPXXGPVXFXXGGGGGXPXXPPXXXGGGGXF 511
GG PPP P GGGGG PP G +
Sbjct: 25 GGCGCAPPPPP-PACGCGGGGGGYAAPPPAYAAPAGGY 61
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 8.0
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +1
Query: 814 KKKXPXPXPPKPPPXPP 864
+ P P PP PPP PP
Sbjct: 1332 RSSSPSPPPPPPPPPPP 1348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,920,523
Number of Sequences: 27780
Number of extensions: 153938
Number of successful extensions: 1809
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1583
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -