Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_J01
         (1283 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC130531-1|AAI30532.1|  491|Homo sapiens Cas-Br-M (murine) ecotr...    32   5.2  
BC130529-1|AAI30530.1|  491|Homo sapiens Cas-Br-M (murine) ecotr...    32   5.2  
BC027460-1|AAH27460.2|  488|Homo sapiens CBLL1 protein protein.        32   5.2  
AK026762-1|BAB15544.1|  491|Homo sapiens protein ( Homo sapiens ...    32   5.2  
AC002467-2|AAS07390.1|  491|Homo sapiens unknown protein.              32   5.2  

>BC130531-1|AAI30532.1|  491|Homo sapiens Cas-Br-M (murine)
           ecotropic retroviral transforming sequence-like 1
           protein.
          Length = 491

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 3/71 (4%)
 Frame = +2

Query: 170 PXXEIXPPPKQTPXIXX---HPPXXXRXXXTXRXQKPPPXXXXHXXPXXXPPXXPLXXXX 340
           P     PPP   P I     HPP           Q PPP       P   PP   +    
Sbjct: 337 PQQHYAPPPPPPPPISHPMPHPPQAAGTPHLVYSQAPPPPMTSAPPPITPPPGHIIAQMP 396

Query: 341 XHXRXPXPAXP 373
            +   P P  P
Sbjct: 397 PYMNHPPPGPP 407


>BC130529-1|AAI30530.1|  491|Homo sapiens Cas-Br-M (murine)
           ecotropic retroviral transforming sequence-like 1
           protein.
          Length = 491

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 3/71 (4%)
 Frame = +2

Query: 170 PXXEIXPPPKQTPXIXX---HPPXXXRXXXTXRXQKPPPXXXXHXXPXXXPPXXPLXXXX 340
           P     PPP   P I     HPP           Q PPP       P   PP   +    
Sbjct: 337 PQQHYAPPPPPPPPISHPMPHPPQAAGTPHLVYSQAPPPPMTSAPPPITPPPGHIIAQMP 396

Query: 341 XHXRXPXPAXP 373
            +   P P  P
Sbjct: 397 PYMNHPPPGPP 407


>BC027460-1|AAH27460.2|  488|Homo sapiens CBLL1 protein protein.
          Length = 488

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 3/71 (4%)
 Frame = +2

Query: 170 PXXEIXPPPKQTPXIXX---HPPXXXRXXXTXRXQKPPPXXXXHXXPXXXPPXXPLXXXX 340
           P     PPP   P I     HPP           Q PPP       P   PP   +    
Sbjct: 334 PQQHYAPPPPPPPPISHPMPHPPQAAGTPHLVYSQAPPPPMTSAPPPITPPPGHIIAQMP 393

Query: 341 XHXRXPXPAXP 373
            +   P P  P
Sbjct: 394 PYMNHPPPGPP 404


>AK026762-1|BAB15544.1|  491|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23109 fis, clone LNG07754. ).
          Length = 491

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 3/71 (4%)
 Frame = +2

Query: 170 PXXEIXPPPKQTPXIXX---HPPXXXRXXXTXRXQKPPPXXXXHXXPXXXPPXXPLXXXX 340
           P     PPP   P I     HPP           Q PPP       P   PP   +    
Sbjct: 337 PQQHYAPPPPPPPPISHPMPHPPQAAGTPHLVYSQAPPPPMTSAPPPITPPPGHIIAQMP 396

Query: 341 XHXRXPXPAXP 373
            +   P P  P
Sbjct: 397 PYMNHPPPGPP 407


>AC002467-2|AAS07390.1|  491|Homo sapiens unknown protein.
          Length = 491

 Score = 31.9 bits (69), Expect = 5.2
 Identities = 19/71 (26%), Positives = 21/71 (29%), Gaps = 3/71 (4%)
 Frame = +2

Query: 170 PXXEIXPPPKQTPXIXX---HPPXXXRXXXTXRXQKPPPXXXXHXXPXXXPPXXPLXXXX 340
           P     PPP   P I     HPP           Q PPP       P   PP   +    
Sbjct: 337 PQQHYAPPPPPPPPISHPMPHPPQAAGTPHLVYSQAPPPPMTSAPPPITPPPGHIIAQMP 396

Query: 341 XHXRXPXPAXP 373
            +   P P  P
Sbjct: 397 PYMNHPPPGPP 407


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,314,064
Number of Sequences: 237096
Number of extensions: 631586
Number of successful extensions: 567
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18440487050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)