Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_I23
(885 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0959 - 21813756-21814097,21814462-21814570,21814688-218147... 31 0.93
05_03_0627 - 16342211-16342264,16342332-16342412,16342751-163428... 31 0.93
04_04_0981 + 29912275-29912814 31 1.2
08_02_0829 - 21604845-21605588 30 2.1
08_02_0210 + 14324539-14324609,14324735-14325740,14325838-143273... 30 2.1
01_01_0365 - 2859617-2859722,2860047-2860489,2862232-2862391,286... 30 2.1
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 29 3.8
09_06_0294 + 22089915-22091333 29 3.8
07_03_0808 - 21668100-21669092 29 3.8
02_03_0259 + 16934848-16935599,16935659-16935911 29 3.8
06_03_1455 + 30264023-30264174,30265930-30266070,30266328-302664... 28 8.7
02_04_0157 + 20388761-20388763,20389807-20389935,20390206-203903... 28 8.7
01_04_0143 + 16689471-16689498,16689687-16689818,16689974-166900... 28 8.7
>10_08_0959 - 21813756-21814097,21814462-21814570,21814688-21814740,
21814849-21815049,21815320-21815433,21815513-21815671,
21816490-21816849,21816928-21817149,21817967-21818093,
21818887-21819023,21819169-21819292,21819665-21820174,
21820255-21820436,21820812-21820862,21821114-21821266,
21821339-21821437,21821519-21821861,21821957-21822030,
21822105-21823025,21823133-21823257,21823419-21823461,
21823574-21823762,21824814-21825074,21825228-21825387,
21826200-21826363,21826523-21827009,21827090-21827431,
21827519-21827836,21828001-21828041,21828136-21828388,
21829158-21829261,21830198-21830386,21830543-21831196,
21831320-21831610,21831739-21831882,21832107-21832205,
21832549-21832657,21832739-21832923,21833008-21833121,
21833270-21833401,21833483-21833815,21833945-21834436,
21834773-21834847,21834917-21835066,21835143-21835241,
21835463-21835547,21837188-21837375,21837513-21837647,
21837729-21837849,21838127-21838194,21838275-21838370,
21838450-21838554,21838665-21838980,21839053-21839142,
21840011-21840181,21840850-21841010,21841088-21841270,
21841839-21841940,21842515-21842632,21842704-21842798,
21842972-21843022,21843107-21843241,21843333-21843436,
21844249-21844414,21844649-21844773,21845220-21845316
Length = 4181
Score = 31.5 bits (68), Expect = 0.93
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 2/123 (1%)
Frame = +3
Query: 360 SLYLKRSYHYLLSASYFNNYQT--NRXRIREALQXNYRTIRGRKPLVS*STSLRGVGRWT 533
S YL S HY+LSAS+ + T ++ + + + R PL SL G WT
Sbjct: 3004 SYYLPISAHYVLSASHLDEEDTSCSQGTLNPGEVVRVQNVDPRNPLY---LSLVPHGGWT 3060
Query: 534 SRVTPH*KATRGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEIT 713
S+ V + H A +K ++ + L+ERI I E + + D L I
Sbjct: 3061 ------------SHEPVPISHPTVAPSKFINLRSSLSERIVQIVLEQSSDKDYLMARAIR 3108
Query: 714 QYI 722
Y+
Sbjct: 3109 IYV 3111
>05_03_0627 -
16342211-16342264,16342332-16342412,16342751-16342849,
16343660-16343770,16343964-16344116,16344741-16344881,
16345456-16345513,16345852-16345967,16346292-16346405,
16346496-16346557,16348788-16348930,16349030-16349097,
16349200-16349379,16349835-16350013,16350447-16350636,
16350920-16350978,16351421-16351574,16352133-16352158,
16352567-16353014
Length = 811
Score = 31.5 bits (68), Expect = 0.93
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = +1
Query: 526 DGLLESHHTERRQGAATTPSRSATRSEPWPKPWTRRSSLPRGFSS 660
DGL S +RR G P R+A +S P P RR+ P G SS
Sbjct: 43 DGLSRSASAQRRGGGGRAPPRAAGKSPAPPPPPPRRA--PAGSSS 85
>04_04_0981 + 29912275-29912814
Length = 179
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = +2
Query: 125 SNALVIFSRIRH*INRIKYEGVCSHRCLSGSGCAGRGRLMLSERRPRMQ----TDFKSAA 292
S + + R+ I R + G+ S +G G GRG +++ + RP+ + F+ A
Sbjct: 59 SGSAAVVGRVYSLIERERRMGLRSRSVAAGGGGGGRG-IVVRDERPKSRAFGWVSFRKAT 117
Query: 293 LQRVLRPIQGQPRCSERTEGISLTVFETFLP 385
RV+ G R+ +S T ET P
Sbjct: 118 SDRVVEVDDG--AALARSSSVSATAVETRAP 146
>08_02_0829 - 21604845-21605588
Length = 247
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 553 ERRQGAATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTM 702
ER + SR+++ +E W R ++ G S+ST +++KT TS+ M
Sbjct: 155 ERWDSSKRPLSRASSTAERWDINKKPRPAVGSGKSNSTSRTMKTTTSAQM 204
>08_02_0210 +
14324539-14324609,14324735-14325740,14325838-14327390,
14327473-14327601,14328345-14328510
Length = 974
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 152 IRH*INRIKYEGVCSHRCLSGSGCAGRGRLMLSERRPRM 268
IRH +N K+ C +SG C L++S R PRM
Sbjct: 739 IRHRVNLAKHTCTCREWQVSGKPCPHALALIISTRNPRM 777
>01_01_0365 - 2859617-2859722,2860047-2860489,2862232-2862391,
2863431-2863516,2863648-2866272
Length = 1139
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/55 (32%), Positives = 24/55 (43%)
Frame = +1
Query: 565 GAATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTSRR 729
G A T + +A S W RR S PR +S + S + SLNT R+
Sbjct: 1064 GGARTSTTAAGASPTTSSIWGRRPSAPRTAASPSSSSTSLLQICSKSESLNTYRK 1118
>11_06_0767 + 27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 553 ERRQGAATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATS 693
+RR G+ + SRS +RS W + +R S R S S S + S
Sbjct: 1229 DRRSGSRSLSSRSRSRSRSWSRSRSRSRSWSRSRSRSRSPSRSRSRS 1275
>09_06_0294 + 22089915-22091333
Length = 472
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 574 TTPSRSATRSEP-WPKPWTRRSSLPRGFSSSTGK 672
T P+ + T P WP PW S+ G+ ++TG+
Sbjct: 179 TLPTMNPTSYPPAWPAPWIELSTTGLGYDTATGE 212
>07_03_0808 - 21668100-21669092
Length = 330
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 580 PSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSST 699
PS + R+ P P + R S P FSS+TG ++ ST
Sbjct: 159 PSTAPRRTPPPPGSASPRPSSPESFSSATGARFRSTCFST 198
>02_03_0259 + 16934848-16935599,16935659-16935911
Length = 334
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +1
Query: 568 AATTPSRSATRSEP-WPKPWTRRSSLPRGFSSST 666
++ TP +++R P WP P TRR P + ST
Sbjct: 229 SSPTPRAASSRPAPRWPSPLTRRDDAPFSVAGST 262
>06_03_1455 +
30264023-30264174,30265930-30266070,30266328-30266430,
30266510-30266659,30267184-30267229,30267383-30267738
Length = 315
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2
Query: 581 RRGRPRDRSPGQSLGH 628
RRGRPR +PG LGH
Sbjct: 184 RRGRPRTPTPGSYLGH 199
>02_04_0157 + 20388761-20388763,20389807-20389935,20390206-20390349,
20390690-20390835,20390915-20391071,20391312-20391370,
20391466-20391664,20392232-20392381,20392471-20392607,
20392717-20392863,20392975-20393076,20395655-20395712,
20395816-20395917,20396236-20396273,20396409-20396535,
20397092-20397259,20397356-20397487,20400222-20400331,
20400400-20400460,20400929-20401106,20401194-20401399,
20401552-20401671,20402523-20402621,20404177-20404386,
20404704-20404843,20404945-20405053,20405351-20405431,
20405523-20405693,20405825-20405974,20407029-20407202,
20407453-20407479,20407688-20407758,20407843-20407942,
20408305-20408361,20409457-20409513,20409656-20409736,
20410336-20410421,20410535-20410649
Length = 1466
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = +2
Query: 107 QYFRHTSNALVIFSRIRH*INRIKYEGVCSHRCLSGSGCAGRGRLMLSERRPRMQTDFKS 286
QY + T A++I S R + +Y G+ + + CA RGRL E R ++
Sbjct: 839 QYRQQTKAAVIIQSYCRSYLAHSQYMGL--KKAAITTQCAWRGRLARRELRKLKMAAKET 896
Query: 287 AALQRVLRPIQGQ 325
ALQ ++ Q
Sbjct: 897 GALQAAKNKLEKQ 909
>01_04_0143 +
16689471-16689498,16689687-16689818,16689974-16690013,
16690214-16690280,16690349-16690431,16690755-16690821,
16692741-16692821,16693696-16693791,16694172-16694198
Length = 206
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 136 CYFFENSPLNKSHQI*RCMLS-SLPVWLWVC 225
CY E + L++ HQI C ++ S V +W C
Sbjct: 71 CYHLEEADLHQCHQILTCTINGSSLVMIWCC 101
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,930,694
Number of Sequences: 37544
Number of extensions: 476624
Number of successful extensions: 1504
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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