Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_I23
(885 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D64154-1|BAA11023.1| 407|Homo sapiens Mr 110,000 antigen protein. 34 0.79
BC037906-1|AAH37906.1| 314|Homo sapiens C4orf19 protein protein. 34 0.79
BC017245-1|AAH17245.1| 407|Homo sapiens adhesion regulating mol... 34 0.79
BC010733-1|AAH10733.1| 296|Homo sapiens Unknown (protein for IM... 34 0.79
AL354836-4|CAC22308.1| 407|Homo sapiens adhesion regulating mol... 34 0.79
AK001879-1|BAA91958.1| 314|Homo sapiens protein ( Homo sapiens ... 34 0.79
BC039294-1|AAH39294.1| 589|Homo sapiens ubiquilin 1 protein. 32 2.4
BC010066-1|AAH10066.1| 561|Homo sapiens ubiquilin 1 protein. 32 2.4
AL354920-5|CAI15101.1| 589|Homo sapiens ubiquilin 1 protein. 32 2.4
AL354920-4|CAI15100.1| 561|Homo sapiens ubiquilin 1 protein. 32 2.4
AF293384-1|AAG02473.1| 589|Homo sapiens PLIC-1 protein. 32 2.4
AF176069-1|AAD49751.3| 589|Homo sapiens ubiquilin protein. 32 2.4
AB209468-1|BAD92705.1| 325|Homo sapiens ubiquilin 1 isoform 1 v... 32 2.4
AB035275-1|BAB20436.1| 589|Homo sapiens DA41 protein. 32 2.4
BC034688-1|AAH34688.1| 685|Homo sapiens ring finger protein (C3... 31 7.3
AY009109-1|AAG49400.1| 685|Homo sapiens ring-H2 protein protein. 31 7.3
AL138966-3|CAH73183.1| 685|Homo sapiens ring finger protein (C3... 31 7.3
AJ010347-1|CAB40414.1| 685|Homo sapiens RING-H2 protein. 31 7.3
AJ010346-1|CAB40413.1| 685|Homo sapiens RING-H2 protein. 31 7.3
X62320-1|CAA44196.1| 593|Homo sapiens Epithelin 1 & 2 protein. 30 9.7
BT006844-1|AAP35490.1| 438|Homo sapiens granulin protein. 30 9.7
BC011571-1|AAH11571.1| 903|Homo sapiens ITCH protein protein. 30 9.7
BC010577-1|AAH10577.1| 593|Homo sapiens granulin protein. 30 9.7
BC000324-1|AAH00324.1| 438|Homo sapiens granulin protein. 30 9.7
AY124489-1|AAM94026.1| 593|Homo sapiens PC cell-derived growth ... 30 9.7
AL356299-4|CAI17959.1| 903|Homo sapiens itchy homolog E3 ubiqui... 30 9.7
AL356299-3|CAI17960.1| 862|Homo sapiens itchy homolog E3 ubiqui... 30 9.7
AL109923-6|CAI21458.1| 903|Homo sapiens itchy homolog E3 ubiqui... 30 9.7
AL109923-5|CAI21459.1| 862|Homo sapiens itchy homolog E3 ubiqui... 30 9.7
AK222522-1|BAD96242.1| 593|Homo sapiens granulin variant protein. 30 9.7
AK023348-1|BAB14535.1| 413|Homo sapiens protein ( Homo sapiens ... 30 9.7
AF095745-1|AAK39399.1| 862|Homo sapiens ubiquitin protein ligas... 30 9.7
AF055008-1|AAC09359.1| 593|Homo sapiens epithelin 1 and 2 protein. 30 9.7
AF038564-1|AAC04845.1| 739|Homo sapiens atrophin-1 interacting ... 30 9.7
AB056663-1|BAB39389.1| 862|Homo sapiens ubiquitin protein ligas... 30 9.7
>D64154-1|BAA11023.1| 407|Homo sapiens Mr 110,000 antigen protein.
Length = 407
Score = 33.9 bits (74), Expect = 0.79
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 541 SHHTERRQGAATTPS--RSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSL 714
S + R Q AA TPS S+TR+ P P S+ + S+G TA S T P L
Sbjct: 205 SSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPTQPIQL 264
Query: 715 N 717
+
Sbjct: 265 S 265
>BC037906-1|AAH37906.1| 314|Homo sapiens C4orf19 protein protein.
Length = 314
Score = 33.9 bits (74), Expect = 0.79
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 520 WEDGLLESHHTERRQGAATTPSRSATRSEPWPKPWTRRSSLPRG 651
W +L + +RQG+ T S S T ++PW W + LP+G
Sbjct: 45 WSSEVLVQKNDPQRQGSKKTESSSRT-ADPWEPCWPHQGPLPQG 87
>BC017245-1|AAH17245.1| 407|Homo sapiens adhesion regulating
molecule 1 protein.
Length = 407
Score = 33.9 bits (74), Expect = 0.79
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 541 SHHTERRQGAATTPS--RSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSL 714
S + R Q AA TPS S+TR+ P P S+ + S+G TA S T P L
Sbjct: 205 SSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPTQPIQL 264
Query: 715 N 717
+
Sbjct: 265 S 265
>BC010733-1|AAH10733.1| 296|Homo sapiens Unknown (protein for
IMAGE:3897044) protein.
Length = 296
Score = 33.9 bits (74), Expect = 0.79
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 541 SHHTERRQGAATTPS--RSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSL 714
S + R Q AA TPS S+TR+ P P S+ + S+G TA S T P L
Sbjct: 94 SSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPTQPIQL 153
Query: 715 N 717
+
Sbjct: 154 S 154
>AL354836-4|CAC22308.1| 407|Homo sapiens adhesion regulating
molecule 1 protein.
Length = 407
Score = 33.9 bits (74), Expect = 0.79
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +1
Query: 541 SHHTERRQGAATTPS--RSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSL 714
S + R Q AA TPS S+TR+ P P S+ + S+G TA S T P L
Sbjct: 205 SSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPSSGNGASTAASPTQPIQL 264
Query: 715 N 717
+
Sbjct: 265 S 265
>AK001879-1|BAA91958.1| 314|Homo sapiens protein ( Homo sapiens
cDNA FLJ11017 fis, clone PLACE1003342. ).
Length = 314
Score = 33.9 bits (74), Expect = 0.79
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 520 WEDGLLESHHTERRQGAATTPSRSATRSEPWPKPWTRRSSLPRG 651
W +L + +RQG+ T S S T ++PW W + LP+G
Sbjct: 45 WSSEVLVQKNDPQRQGSKKTESSSRT-ADPWEPCWPHQGPLPQG 87
>BC039294-1|AAH39294.1| 589|Homo sapiens ubiquilin 1 protein.
Length = 589
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 565 GAATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSST 699
G + PSR+ R +P P PW ++S SS T ++ T ST
Sbjct: 306 GEGSQPSRTENR-DPLPNPWAPQTSQSSSASSGTASTVGGTTGST 349
>BC010066-1|AAH10066.1| 561|Homo sapiens ubiquilin 1 protein.
Length = 561
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 565 GAATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSST 699
G + PSR+ R +P P PW ++S SS T ++ T ST
Sbjct: 306 GEGSQPSRTENR-DPLPNPWAPQTSQSSSASSGTASTVGGTTGST 349
>AL354920-5|CAI15101.1| 589|Homo sapiens ubiquilin 1 protein.
Length = 589
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 565 GAATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSST 699
G + PSR+ R +P P PW ++S SS T ++ T ST
Sbjct: 306 GEGSQPSRTENR-DPLPNPWAPQTSQSSSASSGTASTVGGTTGST 349
>AL354920-4|CAI15100.1| 561|Homo sapiens ubiquilin 1 protein.
Length = 561
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 565 GAATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSST 699
G + PSR+ R +P P PW ++S SS T ++ T ST
Sbjct: 306 GEGSQPSRTENR-DPLPNPWAPQTSQSSSASSGTASTVGGTTGST 349
>AF293384-1|AAG02473.1| 589|Homo sapiens PLIC-1 protein.
Length = 589
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 565 GAATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSST 699
G + PSR+ R +P P PW ++S SS T ++ T ST
Sbjct: 306 GEGSQPSRTENR-DPLPNPWAPQTSQSSSASSGTASTVGGTTGST 349
>AF176069-1|AAD49751.3| 589|Homo sapiens ubiquilin protein.
Length = 589
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 565 GAATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSST 699
G + PSR+ R +P P PW ++S SS T ++ T ST
Sbjct: 306 GEGSQPSRTENR-DPLPNPWAPQTSQSSSASSGTASTVGGTTGST 349
>AB209468-1|BAD92705.1| 325|Homo sapiens ubiquilin 1 isoform 1
variant protein.
Length = 325
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 565 GAATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSST 699
G + PSR+ R +P P PW ++S SS T ++ T ST
Sbjct: 212 GEGSQPSRTENR-DPLPNPWAPQTSQSSSASSGTASTVGGTTGST 255
>AB035275-1|BAB20436.1| 589|Homo sapiens DA41 protein.
Length = 589
Score = 32.3 bits (70), Expect = 2.4
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 565 GAATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSST 699
G + PSR+ R +P P PW ++S SS T ++ T ST
Sbjct: 306 GEGSQPSRTENR-DPLPNPWAPQTSQSSSASSGTASTVGGTTGST 349
>BC034688-1|AAH34688.1| 685|Homo sapiens ring finger protein
(C3H2C3 type) 6 protein.
Length = 685
Score = 30.7 bits (66), Expect = 7.3
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Frame = +1
Query: 469 RFVGENHWSHKAR----H*EGWED-GLLESH--HTERRQGAATTPSRSATRSEPWPKPWT 627
RF E H +H+ R H E + D L +S+ HT RQ +T+P TRS+
Sbjct: 148 RFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRDHTANRQQRSTSPVARRTRSQTSVNFNG 207
Query: 628 RRSSLPRGFSSSTGKSLKTATSSTMPRSLN 717
S++PR +S G++ + ST+ R N
Sbjct: 208 SSSNIPRTRLASRGQNPAEGSFSTLGRLRN 237
>AY009109-1|AAG49400.1| 685|Homo sapiens ring-H2 protein protein.
Length = 685
Score = 30.7 bits (66), Expect = 7.3
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Frame = +1
Query: 469 RFVGENHWSHKAR----H*EGWED-GLLESH--HTERRQGAATTPSRSATRSEPWPKPWT 627
RF E H +H+ R H E + D L +S+ HT RQ +T+P TRS+
Sbjct: 148 RFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRDHTANRQQRSTSPVARRTRSQTSVNFNG 207
Query: 628 RRSSLPRGFSSSTGKSLKTATSSTMPRSLN 717
S++PR +S G++ + ST+ R N
Sbjct: 208 SSSNIPRTRLASRGQNPAEGSFSTLGRLRN 237
>AL138966-3|CAH73183.1| 685|Homo sapiens ring finger protein
(C3H2C3 type) 6 protein.
Length = 685
Score = 30.7 bits (66), Expect = 7.3
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Frame = +1
Query: 469 RFVGENHWSHKAR----H*EGWED-GLLESH--HTERRQGAATTPSRSATRSEPWPKPWT 627
RF E H +H+ R H E + D L +S+ HT RQ +T+P TRS+
Sbjct: 148 RFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRDHTANRQQRSTSPVARRTRSQTSVNFNG 207
Query: 628 RRSSLPRGFSSSTGKSLKTATSSTMPRSLN 717
S++PR +S G++ + ST+ R N
Sbjct: 208 SSSNIPRTRLASRGQNPAEGSFSTLGRLRN 237
>AJ010347-1|CAB40414.1| 685|Homo sapiens RING-H2 protein.
Length = 685
Score = 30.7 bits (66), Expect = 7.3
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Frame = +1
Query: 469 RFVGENHWSHKAR----H*EGWED-GLLESH--HTERRQGAATTPSRSATRSEPWPKPWT 627
RF E H +H+ R H E + D L +S+ HT RQ +T+P TRS+
Sbjct: 148 RFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRDHTANRQQRSTSPVARRTRSQTSVNFNG 207
Query: 628 RRSSLPRGFSSSTGKSLKTATSSTMPRSLN 717
S++PR +S G++ + ST+ R N
Sbjct: 208 SSSNIPRTRLASRGQNPAEGSFSTLGRLRN 237
>AJ010346-1|CAB40413.1| 685|Homo sapiens RING-H2 protein.
Length = 685
Score = 30.7 bits (66), Expect = 7.3
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Frame = +1
Query: 469 RFVGENHWSHKAR----H*EGWED-GLLESH--HTERRQGAATTPSRSATRSEPWPKPWT 627
RF E H +H+ R H E + D L +S+ HT RQ +T+P TRS+
Sbjct: 148 RFSLEIHVNHENRGFEIHGEDYTDIPLSDSNRDHTANRQQRSTSPVARRTRSQTSVNFNG 207
Query: 628 RRSSLPRGFSSSTGKSLKTATSSTMPRSLN 717
S++PR +S G++ + ST+ R N
Sbjct: 208 SSSNIPRTRLASRGQNPAEGSFSTLGRLRN 237
>X62320-1|CAA44196.1| 593|Homo sapiens Epithelin 1 & 2 protein.
Length = 593
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 182 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 307
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>BT006844-1|AAP35490.1| 438|Homo sapiens granulin protein.
Length = 438
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 182 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 307
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 393 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 438
>BC011571-1|AAH11571.1| 903|Homo sapiens ITCH protein protein.
Length = 903
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 580 PSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTS 723
PSR S P P P RR + G S+T +S ++T S P + NT+
Sbjct: 250 PSRPPRPSRP-PPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTN 296
>BC010577-1|AAH10577.1| 593|Homo sapiens granulin protein.
Length = 593
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 182 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 307
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>BC000324-1|AAH00324.1| 438|Homo sapiens granulin protein.
Length = 438
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 182 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 307
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 393 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 438
>AY124489-1|AAM94026.1| 593|Homo sapiens PC cell-derived growth
factor protein.
Length = 593
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 182 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 307
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>AL356299-4|CAI17959.1| 903|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 903
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 580 PSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTS 723
PSR S P P P RR + G S+T +S ++T S P + NT+
Sbjct: 250 PSRPPRPSRP-PPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTN 296
>AL356299-3|CAI17960.1| 862|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 862
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 580 PSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTS 723
PSR S P P P RR + G S+T +S ++T S P + NT+
Sbjct: 209 PSRPPRPSRP-PPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTN 255
>AL109923-6|CAI21458.1| 903|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 903
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 580 PSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTS 723
PSR S P P P RR + G S+T +S ++T S P + NT+
Sbjct: 250 PSRPPRPSRP-PPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTN 296
>AL109923-5|CAI21459.1| 862|Homo sapiens itchy homolog E3 ubiquitin
protein ligase (mouse) protein.
Length = 862
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 580 PSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTS 723
PSR S P P P RR + G S+T +S ++T S P + NT+
Sbjct: 209 PSRPPRPSRP-PPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTN 255
>AK222522-1|BAD96242.1| 593|Homo sapiens granulin variant protein.
Length = 593
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 182 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 307
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>AK023348-1|BAB14535.1| 413|Homo sapiens protein ( Homo sapiens
cDNA FLJ13286 fis, clone OVARC1001154, highly similar to
Homo sapiens clone 24720 epithelin 1 and 2 mRNA. ).
Length = 413
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 182 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 307
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 368 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 413
>AF095745-1|AAK39399.1| 862|Homo sapiens ubiquitin protein ligase
ITCH protein.
Length = 862
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 580 PSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTS 723
PSR S P P P RR + G S+T +S ++T S P + NT+
Sbjct: 209 PSRPPRPSRP-PPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTN 255
>AF055008-1|AAC09359.1| 593|Homo sapiens epithelin 1 and 2 protein.
Length = 593
Score = 30.3 bits (65), Expect = 9.7
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 182 EGVCS----HRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVL 307
+GVC H C +G CA RG L PR + AL+++L
Sbjct: 548 QGVCCADRRHCCPAGFRCAARGTKCLRREAPRWDAPLRDPALRQLL 593
>AF038564-1|AAC04845.1| 739|Homo sapiens atrophin-1 interacting
protein 4 protein.
Length = 739
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 580 PSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTS 723
PSR S P P P RR + G S+T +S ++T S P + NT+
Sbjct: 86 PSRPPRPSRP-PPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTN 132
>AB056663-1|BAB39389.1| 862|Homo sapiens ubiquitin protein ligase
Itch protein.
Length = 862
Score = 30.3 bits (65), Expect = 9.7
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +1
Query: 580 PSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTS 723
PSR S P P P RR + G S+T +S ++T S P + NT+
Sbjct: 209 PSRPPRPSRP-PPPTPRRPASVNGSPSATSESDGSSTGSLPPTNTNTN 255
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,409,611
Number of Sequences: 237096
Number of extensions: 2502860
Number of successful extensions: 13871
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 13312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13848
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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