Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_I23
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical... 31 0.83
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 31 1.4
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 31 1.4
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 31 1.4
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 30 1.9
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 30 1.9
U39678-4|AAK39211.2| 330|Caenorhabditis elegans Hypothetical pr... 29 4.4
AC006693-2|AAF60378.2| 334|Caenorhabditis elegans Serpentine re... 29 5.8
>AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical
protein Y38H6C.14 protein.
Length = 814
Score = 31.5 bits (68), Expect = 0.83
Identities = 19/62 (30%), Positives = 35/62 (56%)
Frame = +1
Query: 514 EGWEDGLLESHHTERRQGAATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATS 693
+G+E+ ES + G++T PS S + SE + + RSS P+ S++ KS + ++
Sbjct: 751 KGYEESF-ESEDKSEKSGSST-PSESGSGSESENESRSSRSSKPKSSKSTSSKSSSSRST 808
Query: 694 ST 699
S+
Sbjct: 809 SS 810
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +1
Query: 568 AATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTS 723
A T+PS T S P P S+LP +SS+ S +A SST P L++S
Sbjct: 22 AVTSPSSLGTSSSPLPSS-ISTSALP--IASSSASSSPSAASSTTPVVLSSS 70
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +1
Query: 568 AATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTS 723
A T+PS T S P P S+LP +SS+ S +A SST P L++S
Sbjct: 229 AVTSPSSLGTSSSPLPSS-ISTSALP--IASSSASSSPSAASSTTPVVLSSS 277
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +1
Query: 568 AATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTS 723
A T+PS T S P P S+LP +SS+ S +A SST P L++S
Sbjct: 229 AVTSPSSLGTSSSPLPSS-ISTSALP--IASSSASSSPSAASSTTPVVLSSS 277
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 514 EGWEDGLLESHHTERRQGAATTPSRSATRSEP---WPKPWTRRSSLPRGFSSSTGKSLKT 684
EG++ G + E++QG AT P R + P T++ S S+T S T
Sbjct: 554 EGFQVGQSQYRPIEKKQGFATLPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTT 613
Query: 685 ATSSTMPRSLNTSRRXS 735
T++T + +TS S
Sbjct: 614 TTTTTPKPTTSTSTSTS 630
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 571 ATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTSRR 729
+TTP+ + T + PKP T S+ +++T + TAT++ P + TS +
Sbjct: 605 STTPTSTTTTTTTTPKPTTSTSTSTS--TTTTTTTSTTATTTPQPTTTTTSEK 655
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 30.3 bits (65), Expect = 1.9
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Frame = +1
Query: 514 EGWEDGLLESHHTERRQGAATTPSRSATRSEP---WPKPWTRRSSLPRGFSSSTGKSLKT 684
EG++ G + E++QG AT P R + P T++ S S+T S T
Sbjct: 554 EGFQVGQSQYRPIEKKQGFATLPLRKVSTVPPTTSTSSTTTQKPSTTTTVPSTTPTSTTT 613
Query: 685 ATSSTMPRSLNTSRRXS 735
T++T + +TS S
Sbjct: 614 TTTTTPKPTTSTSTSTS 630
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/53 (30%), Positives = 29/53 (54%)
Frame = +1
Query: 571 ATTPSRSATRSEPWPKPWTRRSSLPRGFSSSTGKSLKTATSSTMPRSLNTSRR 729
+TTP+ + T + PKP T S+ +++T + TAT++ P + TS +
Sbjct: 605 STTPTSTTTTTTTTPKPTTSTSTSTS--TTTTTTTSTTATTTPQPTTTTTSEK 655
>U39678-4|AAK39211.2| 330|Caenorhabditis elegans Hypothetical
protein C39D10.3a protein.
Length = 330
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +2
Query: 233 GRLMLSERRPRMQT----DFKSAALQRVLRPIQGQP 328
GRLML ++ M+T DFKSA L L P+ +P
Sbjct: 115 GRLMLVTKKHHMETDSILDFKSAILPFALDPLSNEP 150
>AC006693-2|AAF60378.2| 334|Caenorhabditis elegans Serpentine
receptor, class h protein271 protein.
Length = 334
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 601 ISWPTSTV*LLPLVA-FQCGVTREVHLPTP 515
IS TS L P++A F CGV +E +PTP
Sbjct: 63 ISLMTSPFALFPVLAGFPCGVLKEFGIPTP 92
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,789,160
Number of Sequences: 27780
Number of extensions: 373089
Number of successful extensions: 1096
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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