Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_I14
         (885 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF032897-1|AAD01946.1| 1196|Homo sapiens potassium channel subun...    31   5.6  
AC007740-1|AAX93153.1|  940|Homo sapiens unknown protein.              31   5.6  

>AF032897-1|AAD01946.1| 1196|Homo sapiens potassium channel subunit
            protein.
          Length = 1196

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 22/68 (32%), Positives = 31/68 (45%)
 Frame = +1

Query: 121  KHEFRQCGVVNSHSSNGVLGRRQILRDIITSIKPKNCSKFSSKNITGXYKDDADRELHYQ 300
            +HE  +  ++ S S N   G    LR    S +    S+   +N T   +D AD   HYQ
Sbjct: 866  RHESAKADLLRSQSMNDSEGDNCKLRRRKLSFE----SEGEKENSTNDPEDSADTIRHYQ 921

Query: 301  SFKKHLAE 324
            S K+H  E
Sbjct: 922  SSKRHFEE 929


>AC007740-1|AAX93153.1|  940|Homo sapiens unknown protein.
          Length = 940

 Score = 31.1 bits (67), Expect = 5.6
 Identities = 22/68 (32%), Positives = 31/68 (45%)
 Frame = +1

Query: 121 KHEFRQCGVVNSHSSNGVLGRRQILRDIITSIKPKNCSKFSSKNITGXYKDDADRELHYQ 300
           +HE  +  ++ S S N   G    LR    S +    S+   +N T   +D AD   HYQ
Sbjct: 763 RHESAKADLLRSQSMNDSEGDNCKLRRRKLSFE----SEGEKENSTNDPEDSADTIRHYQ 818

Query: 301 SFKKHLAE 324
           S K+H  E
Sbjct: 819 SSKRHFEE 826


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,140,581
Number of Sequences: 237096
Number of extensions: 1894513
Number of successful extensions: 7287
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7287
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)