Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_I11
         (908 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   3.2  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   3.2  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   4.2  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 16  PXHYREFLKILLFSRLLCQTKPKHEANCSKSESQNP 123
           P  +R F+++L   ++LC  +PK E   S ++ Q P
Sbjct: 338 PWVHRVFIELL--PKVLCIERPKKEDEPSDNDDQTP 371


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 19/98 (19%), Positives = 40/98 (40%)
 Frame = +2

Query: 269  KKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYI 448
            + EL    T    +  M++ + K     +  +  H  +  V  +  +I++IRN+LG+  +
Sbjct: 947  RDELIRYSTALRDLTQMMRDIRKSRFSHLHKLTTHMALR-VKHKFTNIMQIRNYLGKLRV 1005

Query: 449  RRVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALI 562
             + +    ++VV         +    SL     S A +
Sbjct: 1006 NQEECRLSLSVVPRDANVQNAVSTTKSLSGGERSYATV 1043


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 318 MFSTCEQTVLTAASSFLDPN 259
           M S CE+T+    SSF DP+
Sbjct: 327 MISACEKTMQRMTSSFPDPH 346


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 849,541
Number of Sequences: 2352
Number of extensions: 18434
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)