Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_I07
(843 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008 36 0.053
02_04_0382 - 22501041-22501279,22501717-22501810 34 0.16
03_06_0471 + 34169562-34169892,34170121-34170347 33 0.38
04_03_0744 + 19237901-19237912,19238119-19238611,19238860-192389... 30 2.0
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 30 2.7
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 29 3.5
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 29 6.1
01_01_0082 + 625198-625719 29 6.1
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 28 8.1
>01_01_0487 - 3591171-3592313,3593522-3593800,3594688-3595008
Length = 580
Score = 35.5 bits (78), Expect = 0.053
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +3
Query: 237 PGHGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDPPQGRPYFKPTPFPGA 407
P Y P + P V PP Y P +G P N + Y +PP GRP P P GA
Sbjct: 388 PEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYGA 446
Query: 408 RG 413
G
Sbjct: 447 GG 448
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = +3
Query: 225 DNNHPGHGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFPG 404
D ++P +E P +PP P+ + Y+P + YY DPP Y+ P P P
Sbjct: 34 DGDNPPESPDHEDPPPSPEYYDPP----PSPDYYDPPHSPDYY-DPPPSPDYYDPPPSPY 88
Query: 405 ARGG 416
GG
Sbjct: 89 YGGG 92
>03_06_0471 + 34169562-34169892,34170121-34170347
Length = 185
Score = 32.7 bits (71), Expect = 0.38
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +3
Query: 255 YEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQG---RPYFKPTPFPG 404
Y P P PP Y P+ GY P GAY PP G +P + P +PG
Sbjct: 56 YPPAGGYPGAQYPPSGYPPSQGGYPP---GAY---PPSGYPQQPGYPPAGYPG 102
>04_03_0744 +
19237901-19237912,19238119-19238611,19238860-19238928,
19239124-19239140,19239260-19239357,19240019-19240156,
19240710-19240899,19241175-19241307,19241505-19242442
Length = 695
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 25 IGNSLRFDNFNIFACDNS*SYKNEILHDFRPRSAGYG 135
+G+S FDNF F + ++KN +F P GYG
Sbjct: 256 VGDSCGFDNFPSFGIE---AFKNTFYFNFNPSYVGYG 289
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +3
Query: 273 RPYIVNP---PKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKP 389
+PY P P P G Y P G Y PP+G+P + P
Sbjct: 266 QPYPPKPQGQPYPPQPQGQPYPPQPYGQTYPPPPKGQPTYPP 307
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +3
Query: 261 PIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPFP 401
P + P IV P Y P+ YEP Y +PP PY P FP
Sbjct: 636 PYPSPPDIVPSPPSYEPSPPSYEP-SPPEYAPEPPVYAPY-PPGIFP 680
>12_02_0800 +
23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
Frame = +3
Query: 237 PGHGNGYEPIDNRPYIVNPPKDYNPNGN--GYEPIDNG--AY--YVDPPQ---GRPYFKP 389
PGHG GY+P + Y+ PP Y N P+ G +Y Y PP+ P +
Sbjct: 332 PGHG-GYQPKNGDAYLSVPPSSYMMNQPVIPVRPVYQGPMSYDGYYGPPRANFNNPNVRD 390
Query: 390 TPFPG 404
PF G
Sbjct: 391 PPFVG 395
>01_01_0082 + 625198-625719
Length = 173
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +3
Query: 237 PGHGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPTPF-PGARG 413
P G GY P + NP YNP +G+ N Y+ PP G Y + F P A
Sbjct: 97 PYGGGGYNPTPS----YNPTPGYNPTPSGWFTPPNMPSYLTPP-GTLYPQDPGFRPNAAA 151
Query: 414 G 416
G
Sbjct: 152 G 152
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 240 GHGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDPPQGRPYFKPT-PFP 401
GHGN + +N+ Y N PK +P NG Y P G+P++ P P P
Sbjct: 113 GHGNPNK--NNQAYHRNGPKRRSPAANGTPSYPAAMPYHQHP-GQPFYYPVIPSP 164
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,002,564
Number of Sequences: 37544
Number of extensions: 349256
Number of successful extensions: 796
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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