Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_I06
         (922 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr...    33   0.38 
U53180-1|AAK68285.1|  492|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AC024772-1|AAF60536.2|  242|Caenorhabditis elegans Hypothetical ...    28   8.2  

>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
           protein F53B6.2a protein.
          Length = 1045

 Score = 32.7 bits (71), Expect = 0.38
 Identities = 18/52 (34%), Positives = 23/52 (44%)
 Frame = +2

Query: 371 VKSKFARWYPGQWSCCRGIRGRLVRPQGVAASAATGSLERCDRRNETRCLIG 526
           V +   RW  G+WS C    G+ VR + VA    +   E    R ET C  G
Sbjct: 291 VSTSCGRWEAGKWSKCTASCGQGVRRRHVACVGGSDCDEGGRPRQETTCYAG 342


>U53180-1|AAK68285.1|  492|Caenorhabditis elegans Hypothetical
           protein D1014.7 protein.
          Length = 492

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 23  HYRRIP*DFETNPISRQGTHAPVHVVPFSK 112
           HYR +     +N + R  +HAP  ++P SK
Sbjct: 412 HYRNVKERVFSNALQRMMSHAPFKIIPISK 441


>AC024772-1|AAF60536.2|  242|Caenorhabditis elegans Hypothetical
           protein Y40C5A.1 protein.
          Length = 242

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = -2

Query: 846 HRHHEMRVHLTVIDXTPQSNCFRASFQQRHSC 751
           H HH   +   V   TP  NCFR     R+ C
Sbjct: 149 HHHHHDSIRNFVHHDTPCRNCFRIIVGSRYHC 180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,570,546
Number of Sequences: 27780
Number of extensions: 401827
Number of successful extensions: 978
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)