Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_I06
         (922 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    23   3.9  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.9  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   5.2  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    22   9.0  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    22   9.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   9.0  

>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 348 NPQLNSCVHEIYFNSFRFTSK 286
           N  +N C++ ++   FRF  K
Sbjct: 54  NSAINPCIYALFSKDFRFAFK 74


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 348 NPQLNSCVHEIYFNSFRFTSK 286
           N  +N C++ ++   FRF  K
Sbjct: 502 NSAINPCIYALFSKDFRFAFK 522


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 17/59 (28%), Positives = 23/59 (38%)
 Frame = -3

Query: 668 ALLSNRSSVKGCPLRTTKHFFSXXGHQIVSAGVVMFSIDVGAEINVLHR*DTLSRSVDH 492
           ALLS R SV  C L T     S    +         S+    E++V+      S + DH
Sbjct: 165 ALLSKRRSVSECSLGTASSTSSTASSRNSDRSAGSPSVSESDEVDVIGYTSNQSDTDDH 223


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +2

Query: 122 FHVTSRSVCLFKTINHLFSNTSLSF--CLHFG*PFERFEKPLL 244
           F++T R   LF T+N +     +SF   L F  P +  EK  L
Sbjct: 236 FNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTL 278


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +2

Query: 122 FHVTSRSVCLFKTINHLFSNTSLSF--CLHFG*PFERFEKPLL 244
           F++T R   LF T+N +     +SF   L F  P +  EK  L
Sbjct: 236 FNITMRRKTLFYTVNIIIPCMGISFLTVLTFYLPSDSGEKVTL 278


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +1

Query: 763  LLERXSETVGL-WSAVYDSQVDSHLMVSVTXAADCMVAAWKVDIDTKLIGGS 915
            +L++   +V L W+A YD        V     +     +W+ DID  L+ GS
Sbjct: 884  VLDKSGRSVQLSWAAPYDGNSPIKRYVIEYKISK---GSWETDIDRVLVPGS 932


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,431
Number of Sequences: 438
Number of extensions: 4793
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29992872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)