Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_I01
         (1257 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090...    33   0.63 
01_06_0146 + 26969011-26969995,26970878-26970930                       29   5.8  

>09_06_0107 +
           20907560-20908491,20908511-20908625,20908967-20909058,
           20909293-20909556,20910714-20911494
          Length = 727

 Score = 32.7 bits (71), Expect = 0.63
 Identities = 13/31 (41%), Positives = 13/31 (41%)
 Frame = +1

Query: 64  PXPXHTTDXTPPNXQTXPXPTXPPXXXPXXP 156
           P P H     PP  QT P P  PP   P  P
Sbjct: 63  PHPHHHVSAAPPPPQTPPSPPPPPPPPPPPP 93


>01_06_0146 + 26969011-26969995,26970878-26970930
          Length = 345

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = +1

Query: 64  PXPXHTTDXTPPNXQTXPXPTXPPXXXPXXPLXY 165
           P P H+ D + P     P P  PP   P  PL +
Sbjct: 59  PSPNHSGDPSRPIPSQAPAPPPPPTADPSPPLPH 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.314    0.135    0.452 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,002,189
Number of Sequences: 37544
Number of extensions: 149602
Number of successful extensions: 272
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 259
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3887643768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)