Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_H21
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 64 1e-10
Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical pr... 57 2e-08
Z50863-1|CAA90736.3| 353|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81044-6|CAB02806.1| 360|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 29 3.3
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 64.1 bits (149), Expect = 1e-10
Identities = 49/150 (32%), Positives = 62/150 (41%), Gaps = 9/150 (6%)
Frame = +1
Query: 172 HSHSHSDE--SPAFKYSKHANEQKEHDK----IYEPDYNLYVSALCSTXXXXXXXXXXXX 333
H HSH D S + +K ++ ++ + + L+V A+ +T
Sbjct: 118 HGHSHEDHGHSHGAESAKQVGDEYQYTGFLSFLNDAKTRLWVYAISATLLISAAPCFILM 177
Query: 334 XXXXDG-TIEKQPLLKILLAFASGGLLGDAFLHLIPHALMPHNDKQG--XXXXXXXXXGT 504
T E PLLK+LLAF SGGLLGDAFLHLIPHA P D G G
Sbjct: 178 FIPIQANTSESGPLLKVLLAFGSGGLLGDAFLHLIPHA-TPAGDGHGHSHSHGHSHGGGG 236
Query: 505 QEHGPHDXXXXXXXXXXXXXXXXXEKTVRL 594
HG HD EK VR+
Sbjct: 237 HSHGAHDMSVGGWVLGGIIAFLTVEKLVRI 266
Score = 59.7 bits (138), Expect = 3e-09
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = +3
Query: 726 FTHNFTDGLAIGASFIAGQSIGYITTVTILLHE 824
FTHNFTDGLAIGASFIAG ++G +T +T+L+HE
Sbjct: 323 FTHNFTDGLAIGASFIAGTTVGIVTMITVLVHE 355
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +2
Query: 830 HEIGDFAILXQSGXSXXK 883
HEIGDFAIL QSG S K
Sbjct: 358 HEIGDFAILIQSGYSKKK 375
>Z82285-8|CAB05297.2| 393|Caenorhabditis elegans Hypothetical
protein T28F3.3 protein.
Length = 393
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/33 (72%), Positives = 29/33 (87%)
Frame = +3
Query: 726 FTHNFTDGLAIGASFIAGQSIGYITTVTILLHE 824
F HN TDGLAIGASF AG ++G+ITT+T+LLHE
Sbjct: 245 FVHNVTDGLAIGASFSAGNTLGWITTLTVLLHE 277
Score = 55.6 bits (128), Expect = 4e-08
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = +1
Query: 367 PLLKILLAFASGGLLGDAFLHLIPHALMPHN 459
P LKILLAF +GGLLGDA LH+IPH+L PH+
Sbjct: 113 PFLKILLAFGAGGLLGDALLHIIPHSLSPHD 143
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2
Query: 830 HEIGDFAILXQSGXS 874
HE+GDFAIL QSG S
Sbjct: 280 HEVGDFAILVQSGFS 294
>Z50863-1|CAA90736.3| 353|Caenorhabditis elegans Hypothetical
protein C14H10.1 protein.
Length = 353
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +3
Query: 687 RHQDCWIFKFSC*FTHNFTDGLAIGASFIAGQSIGYITTVTILLHE 824
+H+ C NF GLA+G+SF+ G +TT+TILLHE
Sbjct: 204 QHKACAYLNLFANIGDNFAHGLAVGSSFLVSTKFGIMTTITILLHE 249
Score = 35.5 bits (78), Expect = 0.051
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +1
Query: 364 QPLLKILLAFASGGLLGDAFLHLIPHA 444
Q L +LL FA G LL D FLHL+P A
Sbjct: 144 QRRLNLLLGFAIGSLLADVFLHLLPEA 170
>Z81044-6|CAB02806.1| 360|Caenorhabditis elegans Hypothetical
protein C30H6.2 protein.
Length = 360
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = +3
Query: 732 HNFTDGLAIGASFIAGQSIGYITTVTILLHE 824
HN DGLA+GASF+ +G+ITT+ ++ HE
Sbjct: 244 HNLVDGLAMGASFMISVKLGFITTIAVICHE 274
>Z82051-9|CAB04820.1| 350|Caenorhabditis elegans Hypothetical
protein T23D5.12 protein.
Length = 350
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -3
Query: 384 EYFK*GLLFNCTIYGYKEKYKEWHYTYKQCRTQSTDV*VVIWFINFIMFFLFVGMFGVLK 205
E K GL+F C IYG + + Y+ D +IWF ++M + FG+
Sbjct: 89 EIMKIGLVFFCGIYGSTICFISVQFLYRYWAL--FDAPKLIWFEGWMMSAWLIYSFGIGA 146
Query: 204 SW 199
+W
Sbjct: 147 TW 148
>Z82051-7|CAB04819.1| 364|Caenorhabditis elegans Hypothetical
protein T23D5.10 protein.
Length = 364
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -3
Query: 384 EYFK*GLLFNCTIYGYKEKYKEWHYTYKQCRTQSTDV*VVIWFINFIMFFLFVGMFGVLK 205
E K GL+F C IYG + + Y+ D +IWF ++M + FG+
Sbjct: 103 EIMKIGLVFFCGIYGSTICFISVQFLYRYWAL--FDAPKLIWFEGWMMSAWLIYSFGIGA 160
Query: 204 SW 199
+W
Sbjct: 161 TW 162
>AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical
protein Y55F3BL.2 protein.
Length = 462
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 732 HNFTDGLAIGASFIAGQSIGYITTVTILLHE 824
HNF DG++IGA+F G ++ +L E
Sbjct: 314 HNFIDGISIGAAFAESLHSGLSISLAVLCEE 344
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,511,725
Number of Sequences: 27780
Number of extensions: 373824
Number of successful extensions: 1099
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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