Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_H18
         (901 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13107-1|CAA31500.1|  153|Drosophila melanogaster protein ( Dros...   157   1e-38
AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p pro...   157   1e-38
AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA...   157   1e-38
BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p pro...   149   4e-36
X85331-1|CAA59680.1|  437|Drosophila melanogaster msh protein.         33   0.53 
AY069763-1|AAL39908.1|  387|Drosophila melanogaster RE01365p pro...    31   1.6  
AF202050-1|AAF20908.1|  244|Drosophila melanogaster nmdyn-D7 pro...    31   1.6  
AE014297-999|AAF54425.1|  387|Drosophila melanogaster CG8362-PA ...    31   1.6  
AF467953-1|AAL76078.1|  426|Drosophila melanogaster histamine-ga...    29   6.6  

>X13107-1|CAA31500.1|  153|Drosophila melanogaster protein (
           Drosophila melanogasterawd mRNA ( abnormal wing disc ).
           ).
          Length = 153

 Score =  157 bits (382), Expect = 1e-38
 Identities = 70/85 (82%), Positives = 79/85 (92%)
 Frame = +2

Query: 152 RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPG 331
           +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RPFFPG
Sbjct: 5   KERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPG 64

Query: 332 LXKYMSSGPVVPMVWEGLNVVKTGR 406
           L  YM+SGPVVPMVWEGLNVVKTGR
Sbjct: 65  LVNYMNSGPVVPMVWEGLNVVKTGR 89



 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = +1

Query: 478 LGRNIIHGSDSVESAKKEIGLWFTDXXVVGWTPAXENXVYE 600
           +GRNIIHGSD+VESA+KEI LWF +  +V WTPA ++ +YE
Sbjct: 113 VGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIYE 153



 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = +3

Query: 414 LGATNPTDSQPGTIRGDLCIQ 476
           LGATNP DS PGTIRGD CIQ
Sbjct: 92  LGATNPADSLPGTIRGDFCIQ 112


>AY113576-1|AAM29581.1|  153|Drosophila melanogaster RH27794p
           protein.
          Length = 153

 Score =  157 bits (382), Expect = 1e-38
 Identities = 70/85 (82%), Positives = 79/85 (92%)
 Frame = +2

Query: 152 RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPG 331
           +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RPFFPG
Sbjct: 5   KERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPG 64

Query: 332 LXKYMSSGPVVPMVWEGLNVVKTGR 406
           L  YM+SGPVVPMVWEGLNVVKTGR
Sbjct: 65  LVNYMNSGPVVPMVWEGLNVVKTGR 89



 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = +1

Query: 478 LGRNIIHGSDSVESAKKEIGLWFTDXXVVGWTPAXENXVYE 600
           +GRNIIHGSD+VESA+KEI LWF +  +V WTPA ++ +YE
Sbjct: 113 VGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIYE 153



 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = +3

Query: 414 LGATNPTDSQPGTIRGDLCIQ 476
           LGATNP DS PGTIRGD CIQ
Sbjct: 92  LGATNPADSLPGTIRGDFCIQ 112


>AE014297-4796|AAF57188.3|  172|Drosophila melanogaster CG2210-PA
           protein.
          Length = 172

 Score =  157 bits (382), Expect = 1e-38
 Identities = 70/85 (82%), Positives = 79/85 (92%)
 Frame = +2

Query: 152 RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPG 331
           +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RPFFPG
Sbjct: 24  KERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPG 83

Query: 332 LXKYMSSGPVVPMVWEGLNVVKTGR 406
           L  YM+SGPVVPMVWEGLNVVKTGR
Sbjct: 84  LVNYMNSGPVVPMVWEGLNVVKTGR 108



 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = +1

Query: 478 LGRNIIHGSDSVESAKKEIGLWFTDXXVVGWTPAXENXVYE 600
           +GRNIIHGSD+VESA+KEI LWF +  +V WTPA ++ +YE
Sbjct: 132 VGRNIIHGSDAVESAEKEIALWFNEKELVTWTPAAKDWIYE 172



 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = +3

Query: 414 LGATNPTDSQPGTIRGDLCIQ 476
           LGATNP DS PGTIRGD CIQ
Sbjct: 111 LGATNPADSLPGTIRGDFCIQ 131


>BT001459-1|AAN71214.1|  118|Drosophila melanogaster GM19775p
           protein.
          Length = 118

 Score =  149 bits (362), Expect = 4e-36
 Identities = 66/82 (80%), Positives = 76/82 (92%)
 Frame = +2

Query: 152 RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPG 331
           +ERTFIMVKPDGVQRGLVG IIERFE+KGFKLV LKF W S+ELL++HY+DL++RPFFPG
Sbjct: 4   KERTFIMVKPDGVQRGLVGKIIERFEQKGFKLVALKFTWASKELLEKHYADLSARPFFPG 63

Query: 332 LXKYMSSGPVVPMVWEGLNVVK 397
           L  YM+SGPVVPMVWEGLNVV+
Sbjct: 64  LVNYMNSGPVVPMVWEGLNVVQ 85


>X85331-1|CAA59680.1|  437|Drosophila melanogaster msh protein.
          Length = 437

 Score = 33.1 bits (72), Expect = 0.53
 Identities = 16/36 (44%), Positives = 20/36 (55%)
 Frame = -2

Query: 288 WRSSSDGHTNFKPTSLKPFFSKRSIMVPTRPRCTPS 181
           WRS+S  H   K TS    FS  S++  TRPR  P+
Sbjct: 41  WRSASAAHHLHKTTSRLSNFSVASLLADTRPRTPPN 76


>AY069763-1|AAL39908.1|  387|Drosophila melanogaster RE01365p
           protein.
          Length = 387

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 152 RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFV 265
           +  T  ++KP  ++ GL+G II      GF+L  ++ +
Sbjct: 245 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMI 282


>AF202050-1|AAF20908.1|  244|Drosophila melanogaster nmdyn-D7
           protein.
          Length = 244

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 152 RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFV 265
           +  T  ++KP  ++ GL+G II      GF+L  ++ +
Sbjct: 102 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMI 139


>AE014297-999|AAF54425.1|  387|Drosophila melanogaster CG8362-PA
           protein.
          Length = 387

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +2

Query: 152 RERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFV 265
           +  T  ++KP  ++ GL+G II      GF+L  ++ +
Sbjct: 245 KNTTLAIIKPHSIKDGLLGDIISEILSNGFRLTAMRMI 282


>AF467953-1|AAL76078.1|  426|Drosophila melanogaster histamine-gated
           chloride channelsubunit protein.
          Length = 426

 Score = 29.5 bits (63), Expect = 6.6
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -3

Query: 551 SVNQRPISFLADSTLSEPWMMLRPRLNAEITADSAGLXVSWV 426
           S+N+  ++++ D  L++ W   RPRL   ++     L V W+
Sbjct: 93  SINEESMTYVTDIFLAQSWRDPRPRLPENMSEQYRILDVDWL 134


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,187,988
Number of Sequences: 53049
Number of extensions: 473745
Number of successful extensions: 1003
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1003
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4382549442
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)