Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_H18
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   120   2e-27
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    49   5e-06
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    32   0.49 

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  120 bits (288), Expect = 2e-27
 Identities = 55/84 (65%), Positives = 66/84 (78%)
 Frame = +2

Query: 155 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGL 334
           ERTFI +KPDGV RGLVG II RFE++G+KLV LK +  S+  L+ HY DL  +PFFP L
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSL 64

Query: 335 XKYMSSGPVVPMVWEGLNVVKTGR 406
            +YMSSGPVV MVW+GL+VVK GR
Sbjct: 65  IEYMSSGPVVAMVWQGLDVVKQGR 88



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +1

Query: 481 GRNIIHGSDSVESAKKEIGLWFTDXXVVGW-TPAXENXVYE 600
           GRNI HGSD+V+SA +EI  WF    +  + +P   + VYE
Sbjct: 113 GRNICHGSDAVDSANREIAHWFKQEEINDYASPFINSWVYE 153



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +3

Query: 414 LGATNPTDSQPGTIRGDLCIQ 476
           LGATNP  S PGTIRGD CIQ
Sbjct: 91  LGATNPLASAPGTIRGDFCIQ 111


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 48.8 bits (111), Expect = 5e-06
 Identities = 21/31 (67%), Positives = 24/31 (77%)
 Frame = +2

Query: 314 RPFFPGLXKYMSSGPVVPMVWEGLNVVKTGR 406
           +PFFP L  YMSSGPVV M+WEG +VVK  R
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRAR 63


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 32.3 bits (70), Expect = 0.49
 Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
 Frame = +2

Query: 167 IMVKPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSEELLQQHYSDLASRPFFPGLXKY 343
           +++KP+ V  R L    +      G ++  ++ +  S  L +Q Y+    + F+  L ++
Sbjct: 14  VVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQGKFFYDRLVRH 73

Query: 344 MSSGPVVPM 370
           +SSGPV+ M
Sbjct: 74  ISSGPVIAM 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,081,742
Number of Sequences: 27780
Number of extensions: 233761
Number of successful extensions: 429
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)