Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_H14
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0066 - 537729-538163                                             93   4e-19
10_07_0174 + 13815478-13815903                                         92   5e-19

>03_01_0066 - 537729-538163
          Length = 144

 Score = 92.7 bits (220), Expect = 4e-19
 Identities = 39/58 (67%), Positives = 52/58 (89%)
 Frame = +1

Query: 151 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQ 324
           IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF+THLMRR++   VRGIS+KLQ
Sbjct: 17  IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFSTHLMRRIQRGPVRGISLKLQ 74



 Score = 33.1 bits (72), Expect = 0.30
 Identities = 18/40 (45%), Positives = 26/40 (65%)
 Frame = +2

Query: 350 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 469
           ++VP+ SALE D I VD +T DML  L   ++ G+ + QP
Sbjct: 83  DFVPDRSALEVDDIRVDKETLDMLTSLGMADLPGV-VRQP 121


>10_07_0174 + 13815478-13815903
          Length = 141

 Score = 92.3 bits (219), Expect = 5e-19
 Identities = 39/58 (67%), Positives = 51/58 (87%)
 Frame = +1

Query: 151 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQ 324
           IEKYY+R+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++   VRGIS+KLQ
Sbjct: 17  IEKYYSRMTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQ 74



 Score = 33.1 bits (72), Expect = 0.30
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +2

Query: 350 NYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQ 466
           ++VPE SALE + I VD +T +ML  L   ++ G++  Q
Sbjct: 83  DFVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,366,378
Number of Sequences: 37544
Number of extensions: 228694
Number of successful extensions: 472
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 472
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)