Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP10_F_H12
(902 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 29 1.2
SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1 |Schizosa... 29 1.2
SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9 |Schizos... 27 2.8
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 27 2.8
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 27 2.8
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.8
SPAC1D4.06c |csk1||cyclin-dependent kinase activating kinase Csk... 27 2.8
SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr 2|||M... 27 4.8
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 4.8
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 26 8.4
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = +2
Query: 170 DDRYADWNNIYSRDLPPTNWPREVAPDTERPYAVNQYGLYN 292
+DRYADWN S D P PR E P V G YN
Sbjct: 208 EDRYADWNFTNSWD-PDCELPRFWGESGE-PVVVEWTGCYN 246
>SPAC1006.05c |och1||alpha-1,6-mannosyltransferase Och1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 396
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 149 IIGVSSQDDRYADWNNIYSRDLPPTNWPREVAP 247
I+G+ + DR DWN+ Y+R + W AP
Sbjct: 254 IVGIEADPDR-PDWNDYYARRVQFCQWTIAAAP 285
>SPAC23H4.02 |ppk9||serine/threonine protein kinase Ppk9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 532
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/41 (43%), Positives = 20/41 (48%)
Frame = -1
Query: 656 PWSPGDPLNTHSTSKSFCSSFAFVTFRTTWXPVDLFDLFAP 534
PW D L THS S SSF+ T+ P DL LF P
Sbjct: 272 PWFIAD-LPTHSRLPSRTSSFSSKHRSVTFSPPDLAILFDP 311
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 738 P*EPFGPAIPGSPSVPLQPSLPGIP 664
P PF IP SP++P+ PS +P
Sbjct: 296 PFYPFDSGIPVSPNIPVSPSSSFVP 320
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 4/30 (13%)
Frame = +3
Query: 759 PKEIREIK--VNQLT--LDDIRKDKKENLV 836
PK I I+ + +LT LDD+RKD +EN+V
Sbjct: 292 PKAIARIEFLIKKLTSLLDDVRKDTRENVV 321
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +2
Query: 674 GRDGCNGTDGEPGIAGPKGSQGPRGYAGSKGDKGDKGEPAHIGRYPKGQKGEPGAXG 844
G G G G P P G G G+ G G+ G G P G +G PG G
Sbjct: 189 GFGGFGGGSGGP----PPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG 241
>SPAC1D4.06c |csk1||cyclin-dependent kinase activating kinase Csk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 306
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +2
Query: 179 YADWNNIYSRDLPPTNWPREVAP--DTERPYAVNQYGLYNRNDIP 307
+ DWN + PP W E+ P DT Y V+ Y+ P
Sbjct: 245 FPDWNKFIFHEYPPKPW-SEILPSVDTSIQYIVSHLVTYSNRASP 288
>SPBC18H10.19 |||human UVRAG |Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/32 (34%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 731 NLLVQLFQVHH-QFHYNHLFLVYPVXPWSPGD 639
N+ +++ H + H +HL +YP+ P SPG+
Sbjct: 139 NIEIRILMAHAIRMHVSHLSKIYPIQP-SPGN 169
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 747 PRGP*EPFG--PAIPGSPSVPLQPSLPGIPG 661
P G PF PA+P P +P + PG PG
Sbjct: 532 PPGMPAPFPGYPAVPAMPGIPGATAPPGAPG 562
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 759 PKEIREIKVNQLTLDDIRKDK-KENLVXMXMQGQPGSGWTS 878
PK + ++ + T+ ++K NL M G PG+G TS
Sbjct: 27 PKTLDQVSSQESTVQVLKKTLLSNNLPHMLFYGSPGTGKTS 67
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,641,173
Number of Sequences: 5004
Number of extensions: 77570
Number of successful extensions: 218
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 215
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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