Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_H09
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           31   1.6  
08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165     30   2.8  
07_01_0119 - 908600-909592,909685-909885                               30   2.8  
12_01_0816 + 7502669-7503145                                           29   4.9  
01_05_0175 - 18936752-18937621,18938855-18941641                       29   4.9  
12_02_0082 - 13372997-13373863,13373928-13374386                       29   6.5  
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474...    29   6.5  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.5  
07_03_1769 + 29377784-29377878,29377993-29378180,29378340-293784...    28   8.5  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 684 RKRHASRREKGGQVSGKRPGSEQESARGSFQGETPG 577
           R R   RR  GG+V+G+     +   RG+++GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>08_02_1006 - 23484861-23485409,23486327-23486488,23486584-23487165
          Length = 430

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -3

Query: 596 SRGKRLVSL*SCRVSPPLT*ASIFVMLVQGGGAYGKTPAT 477
           SRGK L+S  + R  PP   + + V+ + GGG  G  P T
Sbjct: 25  SRGKSLLSPSTPRSPPPSYGSIVTVLSIDGGGVRGIIPGT 64


>07_01_0119 - 908600-909592,909685-909885
          Length = 397

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 813 RGGLKTIVTG*GAAVGLNGGFVHTAQLGANDL 718
           RGG + + T  GA   L  G  H  +LGA+DL
Sbjct: 332 RGGARVVATEVGACEPLRAGVPHWPRLGADDL 363


>12_01_0816 + 7502669-7503145
          Length = 158

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -1

Query: 781 RRSGRAERGVRAHSPAWSERPTPN*DTYSVSYEKAPRFPKGERR 650
           R SG  +R V    PAW ER   + ++ +V  E+A      ERR
Sbjct: 8   RSSGEGDRPVARWWPAWQEREKESLESSAVEGERATAEVGSERR 51


>01_05_0175 - 18936752-18937621,18938855-18941641
          Length = 1218

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +2

Query: 686 IAHAVGISVRCRSFAPSWAVCTN-PPFSPTAAPYPVTIVLSPPRXNRLIXXGXSHW 850
           + H VG+  RCR    SW    + P F+   AP   +   +PPR +R+      H+
Sbjct: 50  LEHEVGLVWRCR-VKTSWTPPDSYPDFALPTAPASASAAAAPPRYDRVPPHAFVHF 104


>12_02_0082 - 13372997-13373863,13373928-13374386
          Length = 441

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/21 (61%), Positives = 13/21 (61%)
 Frame = +1

Query: 604 SCALLFRPWPLTGYLSAFLPS 666
           SCALLF P PL G     LPS
Sbjct: 164 SCALLFSPMPLDGPTLGLLPS 184


>09_04_0424 +
           17444261-17444665,17445974-17446367,17447367-17447425,
           17447507-17447637,17447737-17447833,17447936-17448100
          Length = 416

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 725 FAPSWAVCTNPPFSPTAAPYPVTIVLSPP 811
           F P  AV   PP  P AAP PV + +  P
Sbjct: 67  FVPFHAVGPPPPPQPRAAPPPVAVAMGSP 95


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 260 NESAN---ARGEAVCVLGALPLPRSLTRCAR 343
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>07_03_1769 +
           29377784-29377878,29377993-29378180,29378340-29378472,
           29378580-29378715,29378996-29379072,29379162-29380830,
           29380935-29381018,29381120-29381224,29381302-29381358
          Length = 847

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = -3

Query: 146 ITNFTNKAFFSLHSSCGLSKLINVSYHVWIQINKNLKE 33
           +  +TN +FF+ HS+C  +KLI+   H+  Q  K L E
Sbjct: 149 LKRYTNPSFFTSHSACS-TKLIHQRIHMAKQPPKLLLE 185


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,975,508
Number of Sequences: 37544
Number of extensions: 523717
Number of successful extensions: 1830
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1827
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)