Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_H09
         (877 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128825-1|BAC87626.1|  230|Homo sapiens protein ( Homo sapiens ...    30   9.6  

>AK128825-1|BAC87626.1|  230|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46268 fis, clone TESTI4027262. ).
          Length = 230

 Score = 30.3 bits (65), Expect = 9.6
 Identities = 26/84 (30%), Positives = 36/84 (42%)
 Frame = +2

Query: 563 RTIKIPGVSPWKLPRALSCSDPGRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWA 742
           RT+ +P   P  LP ++S S PG  P  C P S   A   ++     + +   S  P   
Sbjct: 43  RTVVLP---PRTLPLSVSSSLPGLCPSRCRPPSPDSAPLGVVLPPRTLPLSVSSSLPGLC 99

Query: 743 VCTNPPFSPTAAPYPVTIVLSPPR 814
                P SP +AP  V +   PPR
Sbjct: 100 PSRCRPPSPDSAPLGVVL---PPR 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,484,903
Number of Sequences: 237096
Number of extensions: 2734566
Number of successful extensions: 13292
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 12674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13277
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)