Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP10_F_H05
         (873 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20 pro...   200   7e-51
BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20 p...   200   7e-51
BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20 p...   200   7e-51
AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20 p...   200   7e-51
AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20 p...   126   1e-28
BC101386-1|AAI01387.1|  576|Homo sapiens PLEKHN1 protein protein.      33   1.8  
AL645608-8|CAI15570.1|  611|Homo sapiens pleckstrin homology dom...    33   1.8  
BC101387-1|AAI01388.1|  663|Homo sapiens PLEKHN1 protein protein.      31   5.5  

>L06498-1|AAA60286.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  200 bits (487), Expect = 7e-51
 Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
 Frame = +3

Query: 174 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 350
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 351 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 518
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>BC087850-1|AAH87850.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  200 bits (487), Expect = 7e-51
 Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
 Frame = +3

Query: 174 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 350
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 351 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 518
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>BC007507-1|AAH07507.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  200 bits (487), Expect = 7e-51
 Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
 Frame = +3

Query: 174 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 350
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 351 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 518
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>AB061842-1|BAB79480.1|  119|Homo sapiens ribosomal protein S20
           protein.
          Length = 119

 Score =  200 bits (487), Expect = 7e-51
 Identities = 98/116 (84%), Positives = 104/116 (89%), Gaps = 1/116 (0%)
 Frame = +3

Query: 174 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 350
           KD  K   E    IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4   KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63

Query: 351 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 518
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 64  TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119


>AB007156-1|BAA25820.1|   60|Homo sapiens ribosomal protein S20
           protein.
          Length = 60

 Score =  126 bits (303), Expect = 1e-28
 Identities = 57/60 (95%), Positives = 59/60 (98%)
 Frame = +3

Query: 312 KGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 491
           KGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV
Sbjct: 1   KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60


>BC101386-1|AAI01387.1|  576|Homo sapiens PLEKHN1 protein protein.
          Length = 576

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
 Frame = +2

Query: 107 DLKSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALTREGLC* 274
           D +SC S P      +K+   +    QRHR +   G P PP       S     REG   
Sbjct: 471 DPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS-- 524

Query: 275 PHQWSQETEAACKGPSPHANQDPAYHH 355
           P  W   T+    G SP  ++DP Y H
Sbjct: 525 PEPWLPLTD----GRSPRRSRDPGYDH 547


>AL645608-8|CAI15570.1|  611|Homo sapiens pleckstrin homology domain
           containing, family N member 1 protein.
          Length = 611

 Score = 32.7 bits (71), Expect = 1.8
 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
 Frame = +2

Query: 107 DLKSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALTREGLC* 274
           D +SC S P      +K+   +    QRHR +   G P PP       S     REG   
Sbjct: 506 DPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS-- 559

Query: 275 PHQWSQETEAACKGPSPHANQDPAYHH 355
           P  W   T+    G SP  ++DP Y H
Sbjct: 560 PEPWLPLTD----GRSPRRSRDPGYDH 582


>BC101387-1|AAI01388.1|  663|Homo sapiens PLEKHN1 protein protein.
          Length = 663

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
 Frame = +2

Query: 107 DLKSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYPPHQDHSYFSQCALTREGLC* 274
           D +SC S P      +K+   +    QRHR +   G P PP       S     REG   
Sbjct: 558 DPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGSSE 613

Query: 275 PHQWSQETEAACKGPSPHANQDPAYHH 355
           P  W   T+    G SP  ++DP Y H
Sbjct: 614 P--WLPLTD----GRSPRRSRDPGYDH 634


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,954,384
Number of Sequences: 237096
Number of extensions: 2315767
Number of successful extensions: 5097
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5091
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)